Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_P22
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical pr... 32 0.62
U53338-4|AAA96192.3| 235|Caenorhabditis elegans Hypothetical pr... 31 0.82
AF317421-1|AAK69599.1| 235|Caenorhabditis elegans lysosomal-ass... 31 0.82
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical ... 29 3.3
AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical... 29 3.3
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 5.8
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z83235-7|CAD57703.1| 486|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z83235-6|CAD57702.1| 501|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z83235-5|CAD21653.1| 476|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z83235-4|CAB05772.1| 477|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 28 7.7
U21324-12|AAA62559.1| 227|Caenorhabditis elegans Hypothetical p... 28 7.7
AF332206-1|AAK17977.1| 381|Caenorhabditis elegans nuclear recep... 28 7.7
AF273795-1|AAG15143.1| 475|Caenorhabditis elegans nuclear recep... 28 7.7
AF273793-1|AAG15141.1| 474|Caenorhabditis elegans nuclear recep... 28 7.7
>U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical
protein F10E7.9 protein.
Length = 574
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 604 FDGNWLSVLLASNPCLDCGDPSRSLPRGVAAAAGASSCL 720
F N+L VL N D DP +S+P G +A G SS +
Sbjct: 261 FFANFLGVLAGVNMSGDLKDPHKSIPLGELSAVGVSSTI 299
>U53338-4|AAA96192.3| 235|Caenorhabditis elegans Hypothetical
protein C05E11.3 protein.
Length = 235
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 172 ERGSEWLC-CFCLHVRTGTIILGSWHLFLHLVAL 270
E E+ C C C HV+TG I+G H+ + L L
Sbjct: 33 ESSDEYRCLCNCFHVKTGAFIIGCVHVLMILFFL 66
>AF317421-1|AAK69599.1| 235|Caenorhabditis elegans
lysosomal-associated transmembraneprotein protein.
Length = 235
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 172 ERGSEWLC-CFCLHVRTGTIILGSWHLFLHLVAL 270
E E+ C C C HV+TG I+G H+ + L L
Sbjct: 33 ESSDEYRCLCNCFHVKTGAFIIGCVHVLMILFFL 66
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -2
Query: 736 SRDDDEGKSWRRQPQQLLAEGNATGLRNQGMDLTQVTQIASCRQNGDSKVEDLKTEEGQQ 557
++D E + + Q+L AE NA L++ ++++ + + KVE LK EEG
Sbjct: 121 AKDKLEIYETQEENQKLEAEVNALRKEVLESKLSEQSELSKVNETLNMKVESLKIEEGVS 180
Query: 556 IG 551
+G
Sbjct: 181 VG 182
>AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical
protein K03H6.2 protein.
Length = 348
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 604 FDGNWLSVLLASNPCLDCGDPSRSLPRGVAAAAGASSCLRRHLCFDRGRDNKG 762
FD NW ++ L+ ++C DPS LP A A ++ L N G
Sbjct: 89 FDNNWPTMKLSKRILVNCSDPSPILPLTQCAMITAVDTTQKVLVMSFRATNTG 141
>AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical
protein Y54G2A.45 protein.
Length = 354
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 604 FDGNWLSVLLASNPCLDCGDPSRSLPR 684
FD NW ++ ++ ++C DPS LPR
Sbjct: 88 FDNNWPTLKVSKRFLVNCSDPSPILPR 114
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical protein
T23F2.2b protein.
Length = 1538
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = -2
Query: 727 DDEGKSWRRQPQQLLAEGNATGLRNQGMDLTQVTQIASCRQNGDSKVEDLKTEEGQQIGR 548
+DE K+ RQ ++ E + L+N+ + L++ Q+A N + K +E + + R
Sbjct: 1111 EDERKTLERQLKRSQEERSL--LKNKNVQLSKDLQVAMAELNVYKSEKPHKDDEPKNLER 1168
Query: 547 FPTSGAVDHNQCES 506
+ + +HN+ E+
Sbjct: 1169 SSSFSSFNHNKSEN 1182
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical protein
T23F2.2a protein.
Length = 1534
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = -2
Query: 727 DDEGKSWRRQPQQLLAEGNATGLRNQGMDLTQVTQIASCRQNGDSKVEDLKTEEGQQIGR 548
+DE K+ RQ ++ E + L+N+ + L++ Q+A N + K +E + + R
Sbjct: 1111 EDERKTLERQLKRSQEERSL--LKNKNVQLSKDLQVAMAELNVYKSEKPHKDDEPKNLER 1168
Query: 547 FPTSGAVDHNQCES 506
+ + +HN+ E+
Sbjct: 1169 SSSFSSFNHNKSEN 1182
>Z83235-7|CAD57703.1| 486|Caenorhabditis elegans Hypothetical
protein K10C3.6d protein.
Length = 486
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 637 SNPCLDCGDPSRSLPRGVAAAAGASSCLRRHLCFDRG---RDNKGYCISVVWRC 789
+ PC CGD S GV + G RR + D+ R NK I +RC
Sbjct: 17 AEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQKFTCRFNKRCVIDKNFRC 70
>Z83235-6|CAD57702.1| 501|Caenorhabditis elegans Hypothetical
protein K10C3.6c protein.
Length = 501
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 637 SNPCLDCGDPSRSLPRGVAAAAGASSCLRRHLCFDRG---RDNKGYCISVVWRC 789
+ PC CGD S GV + G RR + D+ R NK I +RC
Sbjct: 32 AEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQKFTCRFNKRCVIDKNFRC 85
>Z83235-5|CAD21653.1| 476|Caenorhabditis elegans Hypothetical
protein K10C3.6b protein.
Length = 476
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 637 SNPCLDCGDPSRSLPRGVAAAAGASSCLRRHLCFDRG---RDNKGYCISVVWRC 789
+ PC CGD S GV + G RR + D+ R NK I +RC
Sbjct: 8 AEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQKFTCRFNKRCVIDKNFRC 61
>Z83235-4|CAB05772.1| 477|Caenorhabditis elegans Hypothetical
protein K10C3.6a protein.
Length = 477
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 637 SNPCLDCGDPSRSLPRGVAAAAGASSCLRRHLCFDRG---RDNKGYCISVVWRC 789
+ PC CGD S GV + G RR + D+ R NK I +RC
Sbjct: 8 AEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQKFTCRFNKRCVIDKNFRC 61
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
protein C11E4.6 protein.
Length = 1170
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 361 RTGDVLPTPLSNVETRPSPYSQHASHPSDH 450
R+ D LPT L NV TRP+ + P D+
Sbjct: 432 RSSDTLPTRLKNVRTRPTEKQIASVLPGDN 461
>U21324-12|AAA62559.1| 227|Caenorhabditis elegans Hypothetical
protein C35D10.3 protein.
Length = 227
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 326 SHPQ*VHGAMWGAPEMCCPHHCQMWKLVPAHTLNMLHILVTTA*YTMMRMWVRWLQWVPW 505
++PQ + + + +C P+ +W +V + +L +L+T R VRWL++ W
Sbjct: 22 TNPQKLSFVVGESYAICSPN---LWMIVACTCMTLLTMLMTLYMNCGFRRNVRWLKFTEW 78
Query: 506 AL 511
L
Sbjct: 79 KL 80
>AF332206-1|AAK17977.1| 381|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 381
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 637 SNPCLDCGDPSRSLPRGVAAAAGASSCLRRHLCFDRG---RDNKGYCISVVWRC 789
+ PC CGD S GV + G RR + D+ R NK I +RC
Sbjct: 2 AEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQKFTCRFNKRCVIDKNFRC 55
>AF273795-1|AAG15143.1| 475|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 637 SNPCLDCGDPSRSLPRGVAAAAGASSCLRRHLCFDRG---RDNKGYCISVVWRC 789
+ PC CGD S GV + G RR + D+ R NK I +RC
Sbjct: 7 AEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQKFTCRFNKRCVIDKNFRC 60
>AF273793-1|AAG15141.1| 474|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 474
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 637 SNPCLDCGDPSRSLPRGVAAAAGASSCLRRHLCFDRG---RDNKGYCISVVWRC 789
+ PC CGD S GV + G RR + D+ R NK I +RC
Sbjct: 5 AEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQKFTCRFNKRCVIDKNFRC 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,965,594
Number of Sequences: 27780
Number of extensions: 432880
Number of successful extensions: 1424
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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