Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_P19
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0027 + 178942-179055,179140-179253                               29   4.0  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.9  
12_01_0059 + 494876-494924,496060-496211,496344-496531,496971-49...    28   9.2  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  

>05_01_0027 + 178942-179055,179140-179253
          Length = 75

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 555 EHHKNRRSSQRWRNPTGL*RYQAFPPXKLPRALSCXRPCRL-PDTCPPFSL 704
           E H+ R   +RWR      R   FPP K     SC RPC L P T P F+L
Sbjct: 7   EGHR-RAGCRRWREGMAEAR---FPP-KAYLCDSCLRPCTLHPTTIPAFAL 52


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 352 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 507
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>12_01_0059 +
           494876-494924,496060-496211,496344-496531,496971-497027,
           497123-497282,497389-497457,497712-497837,497972-498091
          Length = 306

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 549 PDEHHKNRR---SSQRWRNPTGL*RYQAFPPXKLPRALSCXRPCRLPD 683
           P +H  N     SS+ + +P G+  +  FP   LP A S  +P  LP+
Sbjct: 10  PGKHRLNDTLLTSSRNYVSPQGILEFYNFPIPSLPSASSNYQPSSLPE 57


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,381,063
Number of Sequences: 37544
Number of extensions: 479369
Number of successful extensions: 1452
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)