Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_P17
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 84 1e-16
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 82 7e-16
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 79 6e-15
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 77 2e-14
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 75 6e-14
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 75 8e-14
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 68 1e-11
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 52 5e-07
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 52 8e-07
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 42 5e-04
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 41 0.001
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 41 0.002
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 37 0.025
01_05_0543 + 23093519-23093624,23093912-23093934 35 0.075
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 35 0.099
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 31 1.2
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 29 6.5
02_04_0216 + 20986231-20988021 29 6.5
01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391 28 8.6
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 84.2 bits (199), Expect = 1e-16
Identities = 47/105 (44%), Positives = 61/105 (58%)
Frame = +3
Query: 129 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYS 308
VDVKYTKL IN +VDA S KTF T++P+ VI +VAEGD D++ AVAAA++AF
Sbjct: 68 VDVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDE-G 126
Query: 309 PWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLVLWKTGKTIRR 443
PW M A +R + +A LET W GKT+ +
Sbjct: 127 PWPRMTAYERCRVLLRFADLIEQHADEIAALET---WDGGKTLEQ 168
Score = 71.3 bits (167), Expect = 9e-13
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +2
Query: 548 MKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
+ EP+GV GQIIPWN+P+ M +WK+ PALA G VVLK AEQTP
Sbjct: 207 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNAVVLKTAEQTP 250
Score = 44.8 bits (101), Expect = 9e-05
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +3
Query: 765 TAGGALTHHPDVDKIAFTGSTEVGRIILGAASAVNL 872
TAG AL+ H VDK+AFTGST G+I+L A+ NL
Sbjct: 279 TAGAALSSHMGVDKLAFTGSTGTGKIVLELAARSNL 314
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 418 GKPVKQSE-EEVYFSASVLRYYAGKADKILGNTIPSE 525
GK ++Q+ EV A +RYY G ADKI G +P++
Sbjct: 163 GKTLEQTTGTEVPMVARYMRYYGGWADKIHGLVVPAD 199
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 81.8 bits (193), Expect = 7e-16
Identities = 43/93 (46%), Positives = 57/93 (61%)
Frame = +3
Query: 132 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYSP 311
+++YTKLFIN +VDA S KTF T +P+ VI +VAEGDK D+DLAV AA++AF +
Sbjct: 42 EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFD-HGE 100
Query: 312 WRTMDASQRGXXXXXXXXXXXSQSRYLAELETL 410
W M S+RG + LA LE+L
Sbjct: 101 WPRMSGSERGRVMAKYAEVVERHADELAALESL 133
Score = 74.5 bits (175), Expect = 1e-13
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = +2
Query: 542 FTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
+T++EP+GV G I+PWN+P M K++PALAAGCTVV+KPAEQTP
Sbjct: 178 YTLREPLGVAGLIVPWNFPAIMFFSKVSPALAAGCTVVVKPAEQTP 223
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/36 (61%), Positives = 29/36 (80%)
Frame = +3
Query: 765 TAGGALTHHPDVDKIAFTGSTEVGRIILGAASAVNL 872
TAG A++ H DVD +AFTGSTEVGR+I+ A++ NL
Sbjct: 252 TAGAAISSHMDVDVVAFTGSTEVGRLIMEASAKSNL 287
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 418 GKPVKQSEE-EVYFSASVLRYYAGKADKILGNTIPSERR 531
GKP+ + +V +LRY+AG ADKI G T+ R+
Sbjct: 136 GKPLAAARAVDVGECVGILRYFAGAADKIHGETLKMSRQ 174
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 78.6 bits (185), Expect = 6e-15
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 542 FTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
+T+KEPVGV G I+PWNYP M +K +PALAAGCT+V+KPAEQTP
Sbjct: 151 YTLKEPVGVVGHIVPWNYPTTMFFFKASPALAAGCTMVVKPAEQTP 196
Score = 59.3 bits (137), Expect = 4e-09
Identities = 35/96 (36%), Positives = 52/96 (54%)
Frame = +3
Query: 123 VKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHR 302
++V V + +L + ++ + KTF T +P+ VI ++AEGDKADIDLAV AA++AF
Sbjct: 12 LQVFVSWKQLKVVDQRFRDLMGKTFETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFD- 70
Query: 303 YSPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETL 410
+ PW M RG LA L+T+
Sbjct: 71 HGPWPRMSGFARGRILHKFADLVEQHVEELAALDTV 106
Score = 51.6 bits (118), Expect = 8e-07
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = +3
Query: 765 TAGGALTHHPDVDKIAFTGSTEVGRIILGAASAVNL 872
TAG A++ H D+DK++FTGSTEVGR+++ AA+ NL
Sbjct: 225 TAGAAISSHMDIDKVSFTGSTEVGRLVMEAAAKSNL 260
Score = 31.5 bits (68), Expect = 0.93
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 460 ASVLRYYAGKADKILGNTIPSER 528
A++LRYYAG ADK+ G T+ R
Sbjct: 124 ANLLRYYAGAADKVHGETLKMAR 146
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 76.6 bits (180), Expect = 2e-14
Identities = 31/51 (60%), Positives = 41/51 (80%)
Frame = +2
Query: 527 GEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
G+ +T++EP+GV G IIPWN+P M K++PALAAGCT+V+KPAEQTP
Sbjct: 154 GKYQGYTLREPIGVVGVIIPWNFPTMMFFLKVSPALAAGCTIVVKPAEQTP 204
Score = 76.2 bits (179), Expect = 3e-14
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +3
Query: 120 MVKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFH 299
+V ++K+TKLFIN E+VDA S KTF T +P+ V+ +AE DKAD+DLAV AA++AF
Sbjct: 19 LVVPEIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAF- 77
Query: 300 RYSPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLVLWKTGKTIRRRSIL-FRKRAQI 476
+ W M +R + LA L+ GK + I+ AQ+
Sbjct: 78 EHGKWPRMSGYERSRVMNKLADLVEQHADELAALDGA---DAGKLLTLGKIIDMPAAAQM 134
Query: 477 LRWKSG 494
+R+ +G
Sbjct: 135 MRYYAG 140
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 765 TAGGALTHHPDVDKIAFTGSTEVGRIILGAASAVNL-NVYL 884
TAG AL+ H DVD +AFTGS E+GR I+ +A+ NL NV L
Sbjct: 241 TAGAALSSHMDVDSVAFTGSAEIGRAIMESAARSNLKNVSL 281
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 457 SASVLRYYAGKADKILGNTI 516
+A ++RYYAG ADKI G ++
Sbjct: 131 AAQMMRYYAGAADKIHGESL 150
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 75.4 bits (177), Expect = 6e-14
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +3
Query: 129 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYS 308
V V YT+L I+ ++VD+ S KTFPT++P+ +I VAEGD DI+ AV AA+KAF
Sbjct: 64 VQVNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDE-G 122
Query: 309 PWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLVLWKTGKT-IRRRSILFRKRAQILRW 485
PW M A +R + +A LET W GK + +I A+++R+
Sbjct: 123 PWPKMTAYERSRILLRFADLIEKHNDEIAALET---WDNGKPYAQAANIEVPMVARLMRY 179
Query: 486 KSG 494
+G
Sbjct: 180 YAG 182
Score = 73.3 bits (172), Expect = 2e-13
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +2
Query: 548 MKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
+ EP+GV GQIIPWN+P+ M +WK+ PALA G TVVLK AEQTP
Sbjct: 203 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTP 246
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 765 TAGGALTHHPDVDKIAFTGSTEVGRIILGAASAVNL 872
TAG AL H DVDKIAFTGST+ G+++L A+ NL
Sbjct: 275 TAGAALASHMDVDKIAFTGSTDTGKVVLELAARSNL 310
Score = 35.5 bits (78), Expect = 0.057
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 418 GKPVKQSEE-EVYFSASVLRYYAGKADKILGNTIPSE 525
GKP Q+ EV A ++RYYAG ADKI G +P++
Sbjct: 159 GKPYAQAANIEVPMVARLMRYYAGWADKIHGLVVPAD 195
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 74.9 bits (176), Expect = 8e-14
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +2
Query: 539 TFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAE 670
++ +KEP+GV G I PWNYP+ M +WK+APALAAGCT VLKP+E
Sbjct: 147 SYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSE 190
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 150 LFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYS--PWRTM 323
LFI W + + P +NP E I + D++LAV+AA+ AF R W
Sbjct: 12 LFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSRA 71
Query: 324 DASQRGXXXXXXXXXXXSQSRYLAELETL 410
+ R + YLA LETL
Sbjct: 72 PGAVRAKYLKAIAAKIKDKKSYLALLETL 100
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +3
Query: 768 AGGALTHHPDVDKIAFTGSTEVGRIILGAAS 860
AG L HP VDKIAFTGSTE G+ I+ AS
Sbjct: 223 AGAPLASHPHVDKIAFTGSTETGKRIMITAS 253
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 67.7 bits (158), Expect = 1e-11
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = +2
Query: 548 MKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
+K+PVGV G + PWN+P+ M++ K+ PALA GCTVV+KP+E TP
Sbjct: 214 LKQPVGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 257
Score = 36.3 bits (80), Expect = 0.033
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +1
Query: 418 GKPVKQSEEEVYFSASVLRYYAGKADKILGNTIP---SERR 531
GKP+K++ EV + AS + Y+A +A +I G+ IP S+RR
Sbjct: 170 GKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRR 210
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 771 GGALTHHPDVDKIAFTGSTEVG-RIILGAASAV 866
G AL V KI FTGST VG +++ G+A+ V
Sbjct: 288 GDALLQSTQVRKITFTGSTAVGKKLMAGSANTV 320
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 52.4 bits (120), Expect = 5e-07
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 21/64 (32%)
Frame = +2
Query: 542 FTMKEPVGVCGQIIPW---------------------NYPIPMMSWKIAPALAAGCTVVL 658
+ KEP+GV G I PW NYP+ M +WK+APALAAGCT VL
Sbjct: 146 YLRKEPIGVVGLITPWYFTFFSHPALIFIYDPSMALMNYPLLMATWKVAPALAAGCTAVL 205
Query: 659 KPAE 670
KP+E
Sbjct: 206 KPSE 209
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 147 KLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF--HRYSPWRT 320
+LF+ EW + P +NP E+ I ++ G D+D AVAAA++A +R W
Sbjct: 9 QLFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKRNRGRDWAR 68
Query: 321 MDASQRGXXXXXXXXXXXSQSRYLAELETL 410
+ R + LA LETL
Sbjct: 69 APGAVRAKYLRAIAAKIIERKSELARLETL 98
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 768 AGGALTHHPDVDKIAFTGSTEVGRIILGAAS 860
AG L+ HP VDK+AFTGS E G+ I+ +A+
Sbjct: 242 AGAPLSSHPGVDKVAFTGSYETGKKIMASAA 272
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +2
Query: 518 LQNGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
+ NG + TF+++EP+GVC I P+N+P + W A+ G T VLKP+E+ P
Sbjct: 147 VSNG-IDTFSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDP 199
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2
Query: 551 KEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQ 673
K P+GV I P+NYP+ + KI PAL AG +VLKP Q
Sbjct: 159 KVPLGVVLAIPPFNYPVNLAVSKIGPALIAGNALVLKPPTQ 199
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +2
Query: 554 EPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
EP+GV I WNYP + I A+AAG VVLKP+E P
Sbjct: 88 EPLGVVLVISAWNYPFLLSIDPIIGAIAAGNAVVLKPSEVAP 129
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +2
Query: 548 MKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
+ EP+GV I WNYP + + A+AAG VVLKP+E P
Sbjct: 115 VSEPLGVVLVISAWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAP 158
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 801 DKIAFTGSTEVGRIILGAAS 860
DKI +TGS VGRI++ AA+
Sbjct: 196 DKIFYTGSGNVGRIVMAAAA 215
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 557 PVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
P+GV G I +N+P ++ W AL G VV K A TP
Sbjct: 180 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 220
>01_05_0543 + 23093519-23093624,23093912-23093934
Length = 42
Score = 35.1 bits (77), Expect = 0.075
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 126 KVDVKYTKLFINNEWVDAVSKKT 194
K+++K+TKLFIN +VDAVS +T
Sbjct: 16 KLEIKFTKLFINGRFVDAVSDET 38
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 34.7 bits (76), Expect = 0.099
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 554 EPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 679
+P+GV WN P+ + + ALAAG V LKP+E P
Sbjct: 116 QPLGVILVFSCWNVPLGLSLEPLVGALAAGNAVALKPSELAP 157
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 557 PVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLK 661
P+GV G I+ WNYP + + A+ +G V+K
Sbjct: 226 PLGVIGAIVSWNYPFHNVFNPMLAAIFSGNAAVIK 260
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 801 DKIAFTGSTEVGRIILGAA 857
DK+ FTGS +GRII+ A
Sbjct: 159 DKVLFTGSARIGRIIMAKA 177
>02_04_0216 + 20986231-20988021
Length = 596
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -3
Query: 298 WNAFFAAATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINS 149
W A AAA A + +A + + V+ + + G V L A+ H+LL+ +
Sbjct: 9 WPAAAAAAPASAAAASAVTVEAVLALLERAISAGDVRRLGAAVHALLVKT 58
>01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391
Length = 598
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 271 AKSISALSP-SATCVMTVSSCGLMVGKVFL 185
A S++ + P ATCV+T+S CG+ G L
Sbjct: 201 ANSVAIVPPLRATCVITMSHCGIGTGVAIL 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,062,710
Number of Sequences: 37544
Number of extensions: 482028
Number of successful extensions: 1362
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -