Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_P12
         (919 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    92   1e-18
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    92   1e-18
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    92   1e-18
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    91   1e-18
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    91   1e-18
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    32   0.96 
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    32   0.96 
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    32   0.96 
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    32   0.96 
AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p pro...    30   5.1  
AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p pro...    30   5.1  
AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB...    30   5.1  
AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-P...    29   6.8  
AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-P...    29   6.8  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +2

Query: 158 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 337
           LAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 338 GG 343
           GG
Sbjct: 69  GG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +2

Query: 158 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 337
           LAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 338 GG 343
           GG
Sbjct: 69  GG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +2

Query: 158 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 337
           LAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 338 GG 343
           GG
Sbjct: 69  GG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = +2

Query: 158 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 337
           LAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 338 GG 343
           GG
Sbjct: 69  GG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = +2

Query: 158 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 337
           LAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 338 GG 343
           GG
Sbjct: 69  GG 70


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 32.3 bits (70), Expect = 0.96
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -1

Query: 283 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 134
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 32.3 bits (70), Expect = 0.96
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -1

Query: 283 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 134
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 32.3 bits (70), Expect = 0.96
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -1

Query: 283 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 134
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 32.3 bits (70), Expect = 0.96
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -1

Query: 283 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 134
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p
           protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -2

Query: 342 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 187
           PPP GI++   + + +     LPL+ + T  + S S++  T   I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460


>AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p
           protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -2

Query: 342 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 187
           PPP GI++   + + +     LPL+ + T  + S S++  T   I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308


>AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB
           protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -2

Query: 342 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 187
           PPP GI++   + + +     LPL+ + T  + S S++  T   I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630


>AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-PA
           protein.
          Length = 157

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 29/95 (30%), Positives = 42/95 (44%)
 Frame = -2

Query: 318 SFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAK*IRGHV 139
           S S P++ S STS P S+  T  S S  +S  +     STS+       PST+       
Sbjct: 47  SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSSDTSSSS 105

Query: 138 THFLSPN*HETCNAERITFVLNKRQQERKQXILRD 34
           T   S +        R+  +   R+QER+Q I R+
Sbjct: 106 TS--SDSEEVDRLRRRLRRLRRLRRQERRQEIRRE 138


>AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-PA
           protein.
          Length = 157

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 29/95 (30%), Positives = 42/95 (44%)
 Frame = -2

Query: 318 SFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAK*IRGHV 139
           S S P++ S STS P S+  T  S S  +S  +     STS+       PST+       
Sbjct: 47  SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSSDTSSSS 105

Query: 138 THFLSPN*HETCNAERITFVLNKRQQERKQXILRD 34
           T   S +        R+  +   R+QER+Q I R+
Sbjct: 106 TS--SDSEEVDRLRRRLRRLRRLRRQERRQEIRRE 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,841,902
Number of Sequences: 53049
Number of extensions: 365975
Number of successful extensions: 1036
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)