Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_P09
(886 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 40 4e-04
SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|ch... 30 0.38
SPAC3H8.07c |||prefoldin subunit 3|Schizosaccharomyces pombe|chr... 28 1.5
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 27 2.7
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 27 4.7
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 27 4.7
SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces p... 26 6.2
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 26 8.2
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 26 8.2
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 26 8.2
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +3
Query: 228 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLA-GANDEEAFEIDQNVEFLH 398
P + +P G+ P++V DG Y +S AI +L RKYG + ++E+ E+++ ++H
Sbjct: 40 PAYTKLSPLGKSPIVVDDGVTYIESAAILEHLVRKYGPSFKPSEEDVAELEKYELWMH 97
>SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 377 VDLEGLLVIGPGEPVLAAEVPADGGA 300
VD++GL PG+P+ PADG A
Sbjct: 719 VDIDGLTTFAPGKPLTLVVHPADGSA 744
>SPAC3H8.07c |||prefoldin subunit 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 169
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 378 QNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVY 488
Q+V+FL + + + V YE ++ L AK + NVY
Sbjct: 65 QSVQFLKERQGDSFTVTYELNDTLNAKAEVEAKDNVY 101
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -3
Query: 257 TERSLWLEVRPVSGEHAVVFEVLASVGEQHTAALPESLASEVM 129
T R L R ++ +V EV ASV EQ T +LP S M
Sbjct: 774 TSRELASSDRNINTGTSVASEVSASVSEQSTVSLPREKMSVFM 816
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 312 CRYLGRKYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEEL--KAKKHEDFSKNV 485
C Y G KY + G ++ +E+ + I A + +E ++++ + +
Sbjct: 112 CLYYGTKYAIEGISEALTWEMQSIGVKVKIIEPGFTATEFRVEEGAGKHYAEYDNLKQKL 171
Query: 486 YPDMLKKLNSIVEANK 533
Y D+L KL + K
Sbjct: 172 YEDLLPKLKTATPPQK 187
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 312 CRYLGRKYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEEL--KAKKHEDFSKNV 485
C Y G KY + G ++ +E+ + I A + +E ++++ + +
Sbjct: 112 CLYYGTKYAIEGISEALTWEMQSIGVKVKIIEPGFTATEFRVEEGAGKHYAEYDNLKQKL 171
Query: 486 YPDMLKKLNSIVEANK 533
Y D+L KL + K
Sbjct: 172 YEDLLPKLKTATPPQK 187
>SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 248
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 315 RYLGRKY-GLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVYP 491
++ GRK + + + A ++ + E L ++Y+ + L + H +FS V
Sbjct: 146 KFFGRKVININQMHQDMAVDVPEGFELLGSTEDCEFQIFYKPRQALTFQGHPEFSTEVVN 205
Query: 492 DMLKKL 509
M+K L
Sbjct: 206 TMVKVL 211
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 453 AKKHE-DFSKNVYPDMLKKLNSIVEANKGH 539
AK E DF + PD + KLN + +N+ H
Sbjct: 400 AKSQEFDFFEAKIPDSIAKLNELTASNENH 429
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 725 SNSYGLPKSKKAFTLGCVRTGLQDFLES 642
SNS L K K + LGC + L++F ES
Sbjct: 289 SNSTELEKQKAYYRLGCAQGLLKNFEES 316
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 672 QDGIARLS*KQDIALPDQVFEAWSSGSQTC 583
Q GIARL+ + DI L D+V+ + S ++C
Sbjct: 11 QRGIARLASQPDIPLDDEVWVSLWSVPESC 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,733,196
Number of Sequences: 5004
Number of extensions: 51198
Number of successful extensions: 146
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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