Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_P09
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932     39   0.005
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205     38   0.008
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530...    38   0.014
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443     37   0.019
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319     36   0.043
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110     33   0.23 
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188     33   0.23 
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931     32   0.53 
03_01_0249 - 1935355-1935827,1936129-1936330                           31   1.2  
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576...    30   2.1  
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899...    30   2.8  
06_01_0786 - 5881178-5881303,5881523-5881627,5882078-5882169,588...    29   6.6  
02_05_1323 + 35700147-35701649                                         29   6.6  
02_01_0557 + 4103721-4104616,4105428-4105626                           29   6.6  
09_04_0448 + 17692650-17692970,17693461-17693811                       28   8.7  
08_02_0841 - 21749599-21749978,21750409-21753367                       28   8.7  

>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
          Length = 219

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
 Frame = +3

Query: 201 DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYA-QSTAICRYLGRKYG------LAGANDE 359
           D  V+    P+   + PFGQ+P    DG  Y  +S AI +Y+ RKY       L   N  
Sbjct: 35  DFTVMEHKSPEHLKRNPFGQIPAFQ-DGDLYLFESRAIGKYILRKYKTREADLLREGNLR 93

Query: 360 EAFEIDQNVEF-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKG 536
           EA  +D   E   H   +  + + YE      A +    ++ V  +  +KL  ++E  + 
Sbjct: 94  EAAMVDVWTEVETHQYNSAISPIVYECIIN-PAMRGIPTNQKVVDESAEKLKKVLEVYEA 152

Query: 537 HIAAGKLTWGDFV 575
            ++      GDFV
Sbjct: 153 RLSQSTYLAGDFV 165


>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
          Length = 220

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
 Frame = +3

Query: 201 DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGA------NDEE 362
           D + +    P+   + PFGQMP          +S A+ RY+ RKY  + A      N  E
Sbjct: 35  DFKAMEHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTE 94

Query: 363 AFEIDQNVEF-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGH 539
           A  +D  +E  +H      +++ YE      A      ++ V  + L+KL  ++E  +  
Sbjct: 95  AAMVDIGIEVEIHQYYPVISSIVYECLFN-PAMYGVPTNQKVVDNSLEKLKKVLEVYEAR 153

Query: 540 IAAGKLTWGDFV 575
           ++      G+F+
Sbjct: 154 LSQNTYLAGNFL 165


>01_04_0021 -
           15151645-15151809,15152184-15152343,15152548-15153025,
           15153243-15153291,15153585-15153734
          Length = 333

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
 Frame = +3

Query: 228 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY-----GLA-GANDEEAFEIDQNVE 389
           P+   + PFG++PVL        QS AI RY+ RKY     GL  G + EE+  +D  ++
Sbjct: 44  PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMVDVWLD 103

Query: 390 F-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWG 566
              H   A    + +     +   +  D  + V  + ++KL  ++   +  ++  +   G
Sbjct: 104 VEAHQHEAAVRPILWHC--IINKFEGRDRDQGVVDESVRKLEKVLGVYEARLSGSRYLAG 161

Query: 567 DFVFTSMFDYLKTM 608
           D +  +   +   M
Sbjct: 162 DRISLADLSHFSNM 175


>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
          Length = 221

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = +3

Query: 186 GQDFE----DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGAN 353
           G DF+    D R  +   P F    PFGQ+PVL    +   +S AI RY+  KY   GA+
Sbjct: 30  GLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGAD 89


>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
          Length = 221

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 18/161 (11%)
 Frame = +3

Query: 228 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAG-AN----------------- 353
           PD   + PFGQ+P          +S AICRY+ RK+     AN                 
Sbjct: 44  PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKHRATDEANLLREGDPSESAVVDAWL 103

Query: 354 DEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANK 533
           D EA   + +V  +   R    A+  E DE + A+     S     + L    + +EA +
Sbjct: 104 DVEALRYEPSVHAVFVQRRVVPALGGEPDERVIAE-----SVARLRETLAVYEARLEATR 158

Query: 534 GHIAAGKLTWGDFVFTSMFDYLKTMLQIPDLEVQYPAFKKV 656
           G++A G+++  D    S F Y +  +++P     + A+ +V
Sbjct: 159 GYLAGGEVSLADL---SHFPYTRYFMEMPYEVPVFGAYPRV 196


>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
          Length = 215

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 228 PDFKPKTPFGQMPVLVIDGKQYA-QSTAICRYLGRK 332
           PD   + PFGQ+P L  DG  +  +S AIC+Y+ RK
Sbjct: 44  PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRK 78


>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
          Length = 216

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
 Frame = +3

Query: 228 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYG---LAGANDEEAFEID--QNVEF 392
           P    + PFGQ+P          +S AI +Y+ RK+G   L  +N  E+  +D    VE 
Sbjct: 44  PPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVES 103

Query: 393 LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWGDF 572
            H   A +  ++      +      D    V  + L+KL   +E  +  ++  K   GDF
Sbjct: 104 SHFDGAMSPIIFQCFIVPMFMGGATDI--GVVNESLEKLKKALEVYEAQLSKSKYLAGDF 161

Query: 573 VFTSMFDYLKTM 608
           +  +   +  T+
Sbjct: 162 ISLADISHFPTV 173


>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
          Length = 218

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 7/123 (5%)
 Frame = +3

Query: 228 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYG------LAGANDEEAFEIDQNVE 389
           P+   + PFG++P L        +S AI +Y+ RKY       L  ++  EA  +D   E
Sbjct: 44  PEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIREAALVDVWTE 103

Query: 390 F-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWG 566
              H      + + +E        +    ++ V  + L+KL  ++E  +  ++  +   G
Sbjct: 104 VEAHQYYPALSPIVFEC-IIFPIMRGVPTNQQVVHESLEKLKKVLETYEARLSGSRYLAG 162

Query: 567 DFV 575
           DF+
Sbjct: 163 DFL 165


>03_01_0249 - 1935355-1935827,1936129-1936330
          Length = 224

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 228 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAG 347
           P F    PFGQ+P          +S AICRY+  +Y  +G
Sbjct: 45  PSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSG 84


>12_01_0675 +
           5759641-5759722,5760247-5760291,5760690-5760775,
           5760888-5760959,5761210-5761263,5761385-5761460,
           5761778-5761839,5762174-5762233,5762331-5762432
          Length = 212

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +3

Query: 165 RMLLAYGGQDFEDHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY 335
           R++L   G D+E   V     PD++   P   +P LV      + S AI  YL  KY
Sbjct: 21  RIVLNLKGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKY 77


>06_03_0529 -
           21788132-21788395,21788414-21788511,21789458-21789953,
           21790033-21790134,21790218-21790270,21790354-21790414,
           21790491-21790640,21791298-21791350,21794125-21794152
          Length = 434

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
 Frame = +3

Query: 228 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGR---KYGLAGANDEEAFEIDQNVEF-L 395
           P+F    P G++PVL        +S AI RY+ R      L G++  +   I+Q ++F  
Sbjct: 67  PEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSA 126

Query: 396 HDIRAKAAA-VYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWGDF 572
            ++ A     +Y            E+F+       L  LN+ + +N  ++    +T  D 
Sbjct: 127 TEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNT-YLVGHSVTLADI 185

Query: 573 VFTSMFDYLKTMLQIPDLEVQYP 641
           V T    Y    + I     ++P
Sbjct: 186 VMTCNLYYGFVRILIKSFTSEFP 208


>06_01_0786 -
           5881178-5881303,5881523-5881627,5882078-5882169,
           5882267-5882336,5882639-5882724,5882916-5883017,
           5883375-5883597,5883693-5883758,5883896-5883986,
           5884019-5884057,5885401-5885548,5885623-5885715,
           5885782-5885886,5886645-5886826,5886912-5887084
          Length = 566

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -3

Query: 251 RSLWLEVRPVSGEHAVVFEVLASVGEQHTAALPESLA 141
           R LW+E RP  G  AV+ +  A  G       PE  A
Sbjct: 46  RLLWVETRPEEGGRAVLVKEAAEPGGDAVDVTPEGFA 82


>02_05_1323 + 35700147-35701649
          Length = 500

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 79  SARRLTTIN*KCLRLCTITSLARLSGRAA 165
           SARR+  +N  C  +C+ TSL    GRAA
Sbjct: 140 SARRVFDVNVSCRDVCSWTSLLTAYGRAA 168


>02_01_0557 + 4103721-4104616,4105428-4105626
          Length = 364

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 604 PCFKYLIWKCNILLSRKSCNPVLTQPKVKAFLDL 705
           PC + ++W    +  +K C  +L  PK   +  L
Sbjct: 188 PCLRLMVWSLEKITGKKDCRYILEYPKAIGYKHL 221


>09_04_0448 + 17692650-17692970,17693461-17693811
          Length = 223

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 258 QMPVLVIDGKQYAQSTAICRYL 323
           ++PVLV DGK  A+ST I  Y+
Sbjct: 55  KVPVLVHDGKPLAESTVIVEYI 76


>08_02_0841 - 21749599-21749978,21750409-21753367
          Length = 1112

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 693 SLHFGLCQDGIARLS*KQDIALPDQVFEAWSSGSQT 586
           S  + L  DG+A LS  +D+ LP  +   W +   T
Sbjct: 18  SSSWSLTSDGLALLSLSRDLILPHSISSTWKASDTT 53


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,759,316
Number of Sequences: 37544
Number of extensions: 334277
Number of successful extensions: 1075
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)