Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_P09
         (886 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        23   3.7  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   6.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   8.6  

>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 617 YLKHGLQVVKHAGEHEITPCQLSGSNVTFVRFNYRV 510
           Y+  G  +   +  HE+ P  L   +V  V  NYRV
Sbjct: 23  YVHEGAFISGTSSFHEMRPDYLLPKDVVVVSSNYRV 58


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 557 QLSGSNVTFVRFNYRVQLLQHIR 489
           Q++G+N+T  + +   QL QH+R
Sbjct: 157 QMNGNNITNFKNSNIFQLKQHMR 179


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +3

Query: 18  YLXIIGNXLRFXXFCFSNRTECPATYHYKLKMPKVVYH 131
           YL      +R   F   N T    T HY+ K    VY+
Sbjct: 106 YLKFSYPRMRAPSFICENETRQGLTLHYRSKRRGFVYY 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,660
Number of Sequences: 438
Number of extensions: 3309
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)