Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_P06
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1186 - 9440805-9440938,9442890-9442986                           53   4e-07
01_03_0048 + 11953517-11953681,11954603-11954669,11954894-11955024     49   5e-06
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230           30   3.0  
07_03_1325 + 25830838-25831440                                         29   5.2  
06_01_0043 - 412675-412798,412891-412997,413104-413197,413733-41...    29   5.2  
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171...    29   6.9  

>01_01_1186 - 9440805-9440938,9442890-9442986
          Length = 76

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 19/44 (43%), Positives = 30/44 (68%)
 Frame = +3

Query: 210 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 341
           + W  ++  DE +  WED+W+DD + DDF+ QLR++LE+   QK
Sbjct: 32  QEWDDKEDGDEAIQQWEDDWDDDDVNDDFSLQLRKELEECNTQK 75


>01_03_0048 + 11953517-11953681,11954603-11954669,11954894-11955024
          Length = 120

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 17/41 (41%), Positives = 29/41 (70%)
 Frame = +3

Query: 207 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKL 329
           ++ W  ++  +E V  WED+W+DD + DDF+ QLR++LE +
Sbjct: 76  SDEWDDKEEGNEAVQQWEDDWDDDDVNDDFSLQLRKELESI 116


>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
          Length = 171

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +3

Query: 207 AENWGTEDADDEDVSVWEDNWEDD 278
           AEN G +DA DED S  E N ED+
Sbjct: 83  AENQGDDDAGDEDASEEEGNDEDE 106


>07_03_1325 + 25830838-25831440
          Length = 200

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 9/22 (40%), Positives = 18/22 (81%)
 Frame = +3

Query: 225 EDADDEDVSVWEDNWEDDVIQD 290
           +DAD+ED+  W++++ D++ QD
Sbjct: 114 DDADEEDLKEWDEDFVDELDQD 135


>06_01_0043 -
           412675-412798,412891-412997,413104-413197,413733-413820,
           413902-413943,414117-414223,414812-414942
          Length = 230

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 228 DADDEDVSVWEDNWED-DVIQDDFNQQLRQQLEKLKDQKS 344
           DADD DV    D+  D D   DD  + L  +LE++K +++
Sbjct: 109 DADDSDVEPRSDDESDEDDDDDDDTEALMAELERIKKERA 148


>11_01_0219 -
           1710206-1710246,1710479-1710620,1710699-1710752,
           1710838-1710909,1711631-1711699,1711807-1711848,
           1711946-1712014,1712130-1712267,1712390-1712500,
           1712576-1712726,1713720-1713775,1714076-1714753
          Length = 540

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 210 ENWGTEDADDEDVSVWEDNWEDD 278
           ENW  ED+D ED    +++ EDD
Sbjct: 199 ENWMEEDSDSEDEEYLDEDEEDD 221


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,748,111
Number of Sequences: 37544
Number of extensions: 286696
Number of successful extensions: 821
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)