Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_P06
         (925 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       27   0.61 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   4.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   7.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.9  

>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 27.5 bits (58), Expect = 0.61
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 497 YIDXXGQTTTRMQ*KKCFICEICDAIALFVT 589
           ++D  GQ T R +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +3

Query: 246 VSVWEDNWEDDVIQDDFNQQLR 311
           +  W++ W+ D +Q D ++  R
Sbjct: 934 IDCWQEEWDADALQQDASRHTR 955


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 577 SNSITNFTNKAFFSLHS 527
           SN+I NFT KAF  L S
Sbjct: 520 SNNIENFTRKAFKDLPS 536


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -3

Query: 284 DDVVFPVVFPNRYIFIISVFCTPIFRGKFFELVILF*QTKVYFLFVSHYTVMI 126
           DD ++ +V+PNR   ++      I R +F E V +     +Y  +   YTV++
Sbjct: 663 DDRMWKIVYPNRLESMLEYSDVQIDRTRFEEAVPVDLNPTIY--YGPDYTVIL 713


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,224
Number of Sequences: 2352
Number of extensions: 12179
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)