Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_P05
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    40   4e-05

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 39.5 bits (88), Expect = 4e-05
 Identities = 25/61 (40%), Positives = 32/61 (52%)
 Frame = +3

Query: 690 LNRIQYAILDEVWRLLXQQIC*CTXXWIXLCXXXLGMXYAFLGCXKNHPIXILEGXQSYI 869
           LNRIQYAIL+E WRL+   I         +    LGM YAFLG  +   +   EG + Y 
Sbjct: 10  LNRIQYAILNEAWRLVADGILNAKDV-DAVMSEGLGMRYAFLGAFEAAHLN-AEGMKKYC 67

Query: 870 D 872
           +
Sbjct: 68  E 68



 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 662 LTREIDGFV 688
           LTREIDGFV
Sbjct: 1   LTREIDGFV 9


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,169
Number of Sequences: 438
Number of extensions: 4109
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)