Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_P01
         (1233 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    31   2.5  
02_04_0103 - 19768288-19768737                                         29   7.5  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    29   9.9  

>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 512 RKKXXXNKXXQKXXXKXKKXXXKXKKXXKKKXKKXK 619
           +KK    K  +K   K KK   K KK  KKK KK K
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKK 103



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 512 RKKXXXNKXXQKXXXKXKKXXXKXKKXXKKKXKKXK 619
           +KK    K  +K   K KK   K KK  KKK KK K
Sbjct: 69  KKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKK 104



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 512 RKKXXXNKXXQKXXXKXKKXXXKXKKXXKKKXKKXK 619
           +KK    K  +K   K KK   K KK  KKK KK K
Sbjct: 70  KKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKK 105



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = +1

Query: 433 KKKXKXKKXXXKKXXKXKXXXXKXXXKKKXXXKQXXTKXXKXXKKK 570
           KKK K KK   KK  K K    K   KKK   K+   K  +    K
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNK 113



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/39 (43%), Positives = 17/39 (43%)
 Frame = +3

Query: 285 KKKXKXXKXXXXXKKKKXXXXXXXXXKKKXKKKXXKXXK 401
           KKK K  K     KKKK         KKK KKK  K  K
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/39 (43%), Positives = 17/39 (43%)
 Frame = +3

Query: 285 KKKXKXXKXXXXXKKKKXXXXXXXXXKKKXKKKXXKXXK 401
           KKK K  K     KKKK         KKK KKK  K  K
Sbjct: 69  KKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 512 RKKXXXNKXXQKXXXKXKKXXXKXKKXXKKKXKKXK 619
           +KK    K  +K   K KK   K KK  KKK KK +
Sbjct: 73  KKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108



 Score = 28.7 bits (61), Expect = 9.9
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = +1

Query: 364 KKKXKKKXQXXXXXKXXXXXXXXKKKXKXKKXXXKKXXKXKXXXXK 501
           KKK KKK +     K        KKK K KK   KK  K +    K
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNK 113



 Score = 28.7 bits (61), Expect = 9.9
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 512 RKKXXXNKXXQKXXXKXKKXXXKXKKXXKKKXKKXK 619
           +KK    K  +K   K K    K KK  KKK KK K
Sbjct: 71  KKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106



 Score = 28.7 bits (61), Expect = 9.9
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 512 RKKXXXNKXXQKXXXKXKKXXXKXKKXXKKKXKKXK 619
           +KK    K  +K   K  K   K KK  KKK KK K
Sbjct: 72  KKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107


>02_04_0103 - 19768288-19768737
          Length = 149

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +2

Query: 512 RKKXXXNKXXQKXXXKXKKXXXKXKKXXKKKXKK 613
           RK+    K  +K   K KK   K KK  KKK KK
Sbjct: 106 RKRKRKRKKKKKKKKKKKKKKKKKKKKKKKKKKK 139


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = -1

Query: 666 VFXXLFXXVXXXXXXXFXFXXFFFXXFFXLXXFFFXXF 553
           V   +F  V       F F  FFF  FF    FFF  F
Sbjct: 71  VLGAIFVLVGQWEGYAFFFFFFFFFFFFFFFFFFFFFF 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.295    0.115    0.295 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,216,726
Number of Sequences: 37544
Number of extensions: 41699
Number of successful extensions: 1294
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (21.8 bits)