Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_O23
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0082 - 13372997-13373863,13373928-13374386                       30   2.8  
03_05_0583 - 25838016-25838684                                         29   3.7  
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534...    29   6.5  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   6.5  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069...    28   8.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
01_02_0036 + 10468636-10468938,10469014-10469109,10469247-104694...    28   8.6  

>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 630 SCALLFRPLPLTGYLSAFLPS 692
           SCALLF P+PL G     LPS
Sbjct: 164 SCALLFSPMPLDGPTLGLLPS 184


>03_05_0583 - 25838016-25838684
          Length = 222

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 616 PGKLPRALSCSDPCRLPDTCPPFSLREAWRFLIAHAV 726
           PG+L     CS+PCR   TC P    E ++ L    V
Sbjct: 161 PGELRAKAGCSNPCRGNSTCGPTKDTEFFKKLCPETV 197


>09_04_0741 -
           19852339-19852497,19853185-19853246,19853352-19853415,
           19853561-19853614,19853744-19853890,19854460-19854564,
           19854651-19854794,19854987-19855093,19855613-19855712,
           19855804-19855833,19856492-19856608,19856705-19856828,
           19857143-19857189,19857272-19857400,19857777-19857852,
           19858446-19858543,19858630-19858671,19858811-19859044
          Length = 612

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 631 RALSCSDPCRLPDTCPPFSLREAWRFLIAHA 723
           R L+C   C  P  CPP+S    W+ ++  A
Sbjct: 466 RELNCKSICHSP-MCPPYSAMTEWQHMVLSA 495


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +1

Query: 526 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRALSCSDPCRLPDTCP 678
           L PP          Q+WR+  PTG   + +FP G LP A     P   PD  P
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPA--PDRQP 63


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 338 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 493
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>12_02_0496 +
           19704429-19704613,19705874-19706736,19706764-19706951,
           19707190-19708200
          Length = 748

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 145 FHCILVVVCPNSSMYLIMSGSKLTLXKGRSAAAKS*GIPL 26
           FH  L  V PNS++   MS   L    GR  + K  G+PL
Sbjct: 260 FHLFLSKVFPNSNLNQAMSYPPLMEDLGRQLSKKCGGLPL 299


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 287 NESAN---ARGEAVCVLGALPLPRSLTRCAR 370
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>01_02_0036 +
           10468636-10468938,10469014-10469109,10469247-10469453,
           10470762-10471097,10471469-10471582,10471634-10471639
          Length = 353

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 707 KRHASRREKGGQVSGKRQGSEQESARGSXPGGNAW 603
           K H  RR +GG      +  E+E+ R S  GG  W
Sbjct: 9   KHHHHRRRRGGGGEDGGEEEEEETGRLSLRGGGFW 43


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,978,350
Number of Sequences: 37544
Number of extensions: 543733
Number of successful extensions: 1712
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)