Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_O18
         (1300 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075312-1|AAL68179.1|  919|Drosophila melanogaster GH01967p pro...    31   3.4  
AE013599-1036|AAF58836.2|  919|Drosophila melanogaster CG30011-P...    31   3.4  
AE013599-1035|AAF58837.2|  932|Drosophila melanogaster CG30011-P...    31   3.4  

>AY075312-1|AAL68179.1|  919|Drosophila melanogaster GH01967p
           protein.
          Length = 919

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 376 PKDSSHQNLEIXLNIE*KPELYPVLKPGTIXVGSXSGA 263
           P+ S   N E  LN + KP+   VL P  I +GS +GA
Sbjct: 340 PQGSPLANAEYELNEKGKPQQLSVLDPAKIEIGSANGA 377


>AE013599-1036|AAF58836.2|  919|Drosophila melanogaster CG30011-PA,
           isoform A protein.
          Length = 919

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 376 PKDSSHQNLEIXLNIE*KPELYPVLKPGTIXVGSXSGA 263
           P+ S   N E  LN + KP+   VL P  I +GS +GA
Sbjct: 340 PQGSPLANAEYELNEKGKPQQLSVLDPAKIEIGSANGA 377


>AE013599-1035|AAF58837.2|  932|Drosophila melanogaster CG30011-PC,
           isoform C protein.
          Length = 932

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 376 PKDSSHQNLEIXLNIE*KPELYPVLKPGTIXVGSXSGA 263
           P+ S   N E  LN + KP+   VL P  I +GS +GA
Sbjct: 353 PQGSPLANAEYELNEKGKPQQLSVLDPAKIEIGSANGA 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,801,645
Number of Sequences: 53049
Number of extensions: 360375
Number of successful extensions: 826
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7028721225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)