Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_O17
(949 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 28 1.7
SPAC17C9.06 |sam50||SAM complex subunit Sam50 |Schizosaccharomyc... 28 2.2
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 27 5.1
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 27 5.1
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 27 5.1
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.7
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 26 6.7
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 26 8.9
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 26 8.9
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 26 8.9
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -1
Query: 370 IVKSIKRNFSAILQPKEAGLELSCR--ELWCKVERNLRVFPFLEVAQSTVNTGVNSDLVH 197
I+ ++K F +I K L+ + R LW K N V L V STVN + D++
Sbjct: 1684 IIPAVKGFFKSIALSK-GNLQDTLRLLNLWFKFGNNSNVINTLNVGISTVNIDIWLDVIP 1742
Query: 196 STRAGVH 176
A +H
Sbjct: 1743 QLIARIH 1749
>SPAC17C9.06 |sam50||SAM complex subunit Sam50 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 475
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 194 TVNEVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAEIPF 355
T + PC+++ L + A+ +FT +TT+ G GL+ GA I F
Sbjct: 421 TYKSILSKPCISTGLGLVYATPAARFELNFTLPIATTEKDIGRKGLQFGAGIDF 474
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 499 KTMRARCAATERMSGWFSKTAHILYSK 579
KTM AR ATE S +FS +A L SK
Sbjct: 505 KTMLARAVATESRSVFFSISASSLTSK 531
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 499 KTMRARCAATERMSGWFSKTAHILYSKH 582
KTM AR ATE + +FS +A L SK+
Sbjct: 425 KTMLARAVATEAKATFFSISASSLTSKY 452
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 520 HIWLSLSSFQSFHLNSKFPVGSFFPICKTKV*GLSFASFG 401
HIWL + F+ NSK +F P V G S FG
Sbjct: 241 HIWL-IKERHYFNQNSKLRCAAFHPTSNLLVVGFSSGLFG 279
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -2
Query: 183 ASTSRHSLVVTTLN----SARPQPRNAANNSQEYESHV 82
AS TT+N SA P+ N N SQE++ HV
Sbjct: 92 ASNQPSQAAQTTINKNTESATPKTVNEINKSQEFQEHV 129
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 346 FSAILQPKEAGLELSCRELWCKVERNLRVFPFLEVAQSTVNTGVN 212
F +LQ K AG +S +LW + V P A +T ++ N
Sbjct: 220 FEQVLQKKNAGFNVSITDLWGRALALKLVNPLTGGANTTFSSVTN 264
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 638 FFYXIRNAFHISYVGTYTACLLYNM 564
F+Y I N F +Y+ YT +L+N+
Sbjct: 1085 FWYQIYNNFDANYLFDYTYVMLFNL 1109
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 644 IFFFYXIRNAFHISYVGTYTACLLYNM 564
I F+Y N F +Y+ YT +L+N+
Sbjct: 1106 ILFWYQFYNEFDGNYIFDYTYVMLFNL 1132
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 25.8 bits (54), Expect = 8.9
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -2
Query: 240 HSRLLTQGSIRTSFTVHALASTSRHSLVVTTLNSARPQPRN---AANNSQEYESHVVHAD 70
+S + + S+R S ASTS+ S+ + N PQ + NN ++Y++ + +
Sbjct: 251 NSNVPSSDSVRNSSPNQYYASTSKQSIPSQSQNLQPPQKASVLGTVNNYRQYQNSFISLN 310
Query: 69 AVQL*HQNL 43
Q N+
Sbjct: 311 DYQAAQSNI 319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,088,444
Number of Sequences: 5004
Number of extensions: 57757
Number of successful extensions: 141
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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