Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_O16
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0861 - 28348669-28348711,28349471-28349557,28349640-283497...    50   3e-06
05_05_0192 - 23128460-23128502,23129130-23129216,23129299-231294...    30   2.8  
07_03_1106 + 24017601-24019955                                         29   3.7  
04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,134...    29   4.9  
01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036           29   4.9  
08_02_1243 - 25527523-25527960,25527993-25528604                       28   8.6  

>03_05_0861 -
           28348669-28348711,28349471-28349557,28349640-28349784,
           28350832-28350900,28351147-28351207,28351375-28351493,
           28351659-28351713
          Length = 192

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 28/86 (32%), Positives = 42/86 (48%)
 Frame = +3

Query: 153 DGYAILEXFLHVAECDEIKAAGLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRC 332
           +GY +L  F    E   ++    E  +      +   FST +   +K+ +F +S + I  
Sbjct: 18  NGYLVLGSFSSAEEVRAMRDRMAELVDGFDGAGD--VFSTKDHRQVKNDFFFKSAENISF 75

Query: 333 FFEEGAIDADGNLTVEPEISLNKVGH 410
           FFEE A   DG L    E+S+NKVGH
Sbjct: 76  FFEEKAFGDDGCLKQAKELSINKVGH 101


>05_05_0192 -
           23128460-23128502,23129130-23129216,23129299-23129443,
           23130812-23130872,23131046-23131164,23131320-23131374
          Length = 169

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 153 DGYAILEXFLHVAECDEIKAAGLEFTENLPDIEERA-TFSTTEKTHLKDKYFLESNDKIR 329
           +GY +L  F   +  +E+KA        +   +     FST +   +K+ +F +S + I 
Sbjct: 18  NGYLVLGSF---SSAEEVKAMRDRMAVLIDGFDGAGDVFSTKDHRQVKNDFFFKSAENIS 74

Query: 330 CFFEEG 347
            FFE+G
Sbjct: 75  FFFEDG 80


>07_03_1106 + 24017601-24019955
          Length = 784

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 275 CCRERCSLLYVWQVFSEFQSSGF--DFITFRNM 183
           CCR R       QVF E ++SGF  D +TF ++
Sbjct: 252 CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 284


>04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,
            1342225-1342799,1343596-1343703,1345823-1346155,
            1346783-1349306
          Length = 1630

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -2

Query: 598  GVGSVYRYVAS*CATTSEPMPGFLKIYMLCTTAGSIK--PSSLQMLFTRSLYV*HLKI 431
            GVG+  +YV S      + +P  L+ Y++    GS+     ++ MLFTR   +  L++
Sbjct: 1281 GVGNEVKYVISKVWVQCKGLPSELREYLIICAVGSLLGITKAVDMLFTRRYDIARLQV 1338


>01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036
          Length = 1011

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 381 PEISLNKVGHALHLLHPIFRCYTYSERVK 467
           PE ++ ++GH  HLL   +R YT S RVK
Sbjct: 718 PE-TITRLGHMRHLLSGRYRYYTRSHRVK 745


>08_02_1243 - 25527523-25527960,25527993-25528604
          Length = 349

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 738 RLKPRHCLHLGCGSNVCALL-TCESLETATDSRFELWLLQELSRS 607
           R + R CL LGC +N+ A L T E   TA       W+ Q+ + S
Sbjct: 37  RFRRRICLSLGCTANILASLPTREGWWTAFVLYHGCWMTQQAATS 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,942,748
Number of Sequences: 37544
Number of extensions: 469323
Number of successful extensions: 1137
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)