Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_O09
(885 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1567 - 27916010-27916118,27916256-27916391,27916675-279167... 81 1e-15
03_04_0131 - 17551438-17551549,17552080-17552215,17552361-175524... 80 3e-15
09_06_0330 - 22376394-22376505,22376609-22376744,22376835-223769... 68 9e-12
12_01_0951 - 9471391-9471597,9471857-9471966,9473173-9473278,947... 29 3.8
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 29 3.8
05_04_0275 - 19650555-19650625,19650927-19651221,19651593-196518... 29 5.0
09_04_0183 + 15389691-15390197,15391259-15391582 28 8.7
06_03_0819 - 24977204-24977290,24977372-24977746,24977823-249781... 28 8.7
>08_02_1567 -
27916010-27916118,27916256-27916391,27916675-27916771,
27916866-27916970,27917058-27917240,27917764-27917823,
27917909-27918096,27919234-27919294
Length = 312
Score = 81.0 bits (191), Expect = 1e-15
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Frame = +1
Query: 193 DDAMAILIAILSEKYFDGPELIALTTGHGNTDEEQVTINNQQILKLAGRQDIPIYRGSAE 372
DD+M IL+A + E+I LTT GNT + T N + + AG ++P+ GSAE
Sbjct: 45 DDSMTILMAFRAPTV----EIIGLTTIFGNTTTKNATQNALLLCERAGHPEVPVAEGSAE 100
Query: 373 ALVSPFGNV--WYYGLDGLGDNNDSYTDLFPPAEESAAFALIENSKKYEGSLSVVTIGTL 546
L V + +G DGLG N +E+AA ++ ++ G +S++ +G L
Sbjct: 101 PLKGGEPRVADFVHGSDGLG-NLFLPAPTSKKVDENAAEFMVNKVSQFPGEVSILALGPL 159
Query: 547 TNIAVAMKYDPKFLDRLSHLYIGAGHLYS--KEDPKPEFNALMDVEAYHVVMQK-ADPEK 717
TN+A+A+K DP F ++ + + G ++ P E N D EA +V AD +
Sbjct: 160 TNVALAIKRDPSFASKVKKIVVLGGAFFAAGNVSPAAEANIYGDPEAADIVFTSGADVDV 219
Query: 718 VTI 726
V I
Sbjct: 220 VGI 222
>03_04_0131 -
17551438-17551549,17552080-17552215,17552361-17552468,
17552803-17552899,17553003-17553107,17553207-17553392,
17553679-17553738,17553883-17553990
Length = 303
Score = 79.8 bits (188), Expect = 3e-15
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Frame = +1
Query: 202 MAILIAILSEKYFDGPELIALTTGHGNTDEEQVTINNQQILKLAGRQDIPIYRGSAEALV 381
MAI +A+ S + EL+ LTT GN T N +L+ GR DIP+ GS +
Sbjct: 1 MAIFVALRSPEV----ELLGLTTIFGNVYTTLATRNALHLLEAVGRTDIPVAEGSHVTIK 56
Query: 382 SPFG---NVWYYGLDGLGDNNDSYTDLFPPAEESAAFALIENSKKYEGSLSVVTIGTLTN 552
+ +G DGLG+ N P ++SAA L+E + Y G ++VV +G LTN
Sbjct: 57 KATKLRIASFVHGSDGLGNQNFP-PPTGKPLDQSAAAFLVEQANLYPGQVTVVALGPLTN 115
Query: 553 IAVAMKYDPKFLDRLSHLYI--GAGHLYSKEDPKPEFNALMDVEAYHVV 693
+A+A++ DP F ++ + I GA + +P E N D +A +V
Sbjct: 116 LALAIELDPSFPKKIGQIVILGGAYSVNGNVNPAAEANIFGDPDAADIV 164
>09_06_0330 -
22376394-22376505,22376609-22376744,22376835-22376942,
22377056-22377152,22377490-22377594,22377699-22377884,
22378312-22378371,22378545-22378781
Length = 346
Score = 68.1 bits (159), Expect = 9e-12
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Frame = +1
Query: 331 AGRQDIPIYRGSAEALVSPFGNV--WYYGLDGLGDNNDSYTDLFPPAEESAAFALIENSK 504
AGR ++P+ GSAE L +V + +G DGLG+ + E+SAA L++
Sbjct: 83 AGRPEVPVAEGSAEPLKGGKPHVADFVHGSDGLGNTSFPDPTTTNKVEQSAAEFLVDKVS 142
Query: 505 KYEGSLSVVTIGTLTNIAVAMKYDPKFLDRLSHLYIGAGHLYS--KEDPKPEFNALMDVE 678
+ G +SV+ +G LTNIA+AMK D F ++ + + G ++ P E N D E
Sbjct: 143 ESPGEISVLALGPLTNIALAMKKDSSFASKVKRIVVLGGAFFAAGNATPSAEANIHSDPE 202
Query: 679 AYHVV 693
A +V
Sbjct: 203 AADIV 207
>12_01_0951 -
9471391-9471597,9471857-9471966,9473173-9473278,
9474719-9475060,9475598-9475647,9476745-9477717
Length = 595
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +1
Query: 130 CCCVSATTNRPKY-----IIDNDAGGDDAMAILIAILSEKYFDG 246
CC V+ T RP Y +D D DD + I + I +FDG
Sbjct: 195 CCDVNITIGRPSYELQLRWLDWDHNYDDLLPIAVRIAERGWFDG 238
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 571 YDPKFLD-RLSHLYIGAGHLYSKEDPKPEFNALMDVE 678
YDP +D R++ LY+ A HL + PK E ++ +E
Sbjct: 146 YDPIKIDSRVTALYVDASHLVGLDGPKLELIKMLRIE 182
>05_04_0275 -
19650555-19650625,19650927-19651221,19651593-19651895,
19651978-19652182,19652266-19652501,19652619-19652816,
19653785-19653907,19654227-19654514,19654618-19654794,
19655580-19655915,19656753-19656863,19656977-19657227,
19657431-19657566
Length = 909
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 262 LTTGHGNTDEEQVTINNQQILKLAGRQDIPIYRGSAEAL 378
L +G+G + + I IL + GR DIP+ RGS AL
Sbjct: 543 LVSGNGWANVASIDIV-YDILHMMGRDDIPVGRGSTSAL 580
>09_04_0183 + 15389691-15390197,15391259-15391582
Length = 276
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -3
Query: 655 IRVLGLLCYTNVPLLYTNAKGGPKISGRTSLPRQCSSMFQWLQRK 521
+ ++ L C+T + TN G +SGR + WLQ++
Sbjct: 83 VLIVVLFCFTVFAFVVTNKGAGEAVSGRGYKEYRLGDYSNWLQKR 127
>06_03_0819 -
24977204-24977290,24977372-24977746,24977823-24978199,
24978456-24978770,24978861-24979296,24979386-24979463
Length = 555
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 567 EVRPEIFGPPFAFVYRSGTFV*QRRPKTRIQRLD 668
+ R EIFGP +RS + + RPK IQR D
Sbjct: 211 KARSEIFGPLVLLQFRSWSRLPLGRPKNIIQRTD 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,290,799
Number of Sequences: 37544
Number of extensions: 506214
Number of successful extensions: 1204
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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