Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_O09
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical pr... 87 1e-17
AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical... 85 8e-17
AC006801-1|AAF60752.2| 501|Caenorhabditis elegans Hypothetical ... 31 0.83
Z71262-5|CAA95818.1| 606|Caenorhabditis elegans Hypothetical pr... 31 1.4
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 30 2.5
Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical pr... 29 4.4
U88174-4|AAB42275.1| 280|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical
protein F13H8.3 protein.
Length = 374
Score = 87.4 bits (207), Expect = 1e-17
Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Frame = +1
Query: 133 CCVSATTNRPKYIIDNDAGGDDAMAILIAILSEKYFDGPELIALTTGHGNTDEEQVTINN 312
C VS T K IID D DD + IA+ ++ E+IA+TT HG Q N
Sbjct: 16 CSVSRPT--VKLIIDTDGVYDDIRGLTIALTNQNV----EVIAITTVHGGVTANQSAANV 69
Query: 313 QQILKLAGRQDIPIYRGSAEALVSPFG--NVW--YYGLDGLGDNNDSYTDLFPPAEESA- 477
++L+ G+ ++P++ G+ ++LV P G VW +G DG+G D P SA
Sbjct: 70 ARLLRAIGKHNVPVFIGAQDSLV-PKGPIQVWEELFGSDGIGGVPDVEPKTLPSDFNSAQ 128
Query: 478 ---AFALIENSKKYEGSLSVVTIGTLTNIAVAMKYDPKFLDRLSHL------YIGAGHLY 630
A I N K + +V +G LTNIA+A++ DP R+ + Y+G G+
Sbjct: 129 VGNAVDAIINLTKSTKDIILVGLGPLTNIAMAIRKDPDISKRVKQVVIMGGNYLGVGN-- 186
Query: 631 SKEDPKPEFNALMDVEAYHVVM 696
++ + EFN LMD EA H+V+
Sbjct: 187 TQFNSTAEFNFLMDPEAAHIVL 208
>AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical
protein Y43F8C.13 protein.
Length = 338
Score = 84.6 bits (200), Expect = 8e-17
Identities = 60/207 (28%), Positives = 113/207 (54%), Gaps = 11/207 (5%)
Frame = +1
Query: 148 TTNRPKYIIDNDAGGDDAMAILIAILSEKYFDGPELIALTTGHGNTDEEQVTINNQQILK 327
T ++ K +ID+D DD AI +A+ K E++A T HG +Q N ++ ++
Sbjct: 2 TVDKVKLVIDSDGVSDDVRAISLALQHPK----AEILAFTAVHGCVTVDQACANIKRTIR 57
Query: 328 LAGRQDIPIYRGSAEALVS-PFGNVW--YYGLDGLGDNNDSYTDL----FPPAEESAAFA 486
R +IP+Y+G+A++++S P + ++G+DG+GD + + + F + A+ A
Sbjct: 58 ANDRSNIPVYKGAAKSILSLPKDDTVSDFFGIDGIGDKPEEFPKVERSDFEGEGKHASLA 117
Query: 487 LIENSKKYEGSLSVVTIGTLTNIAVAMKYDPKFLDRLSHLYIGAGHLYSKED----PKPE 654
LI+ ++ + ++VTIG LTN+A+A++ +F S L I G+ Y+ + E
Sbjct: 118 LIDILRENRDA-TLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYYAVGNVDGGSSAE 176
Query: 655 FNALMDVEAYHVVMQKADPEKVTILPF 735
+N D EA +V+++ +TI+P+
Sbjct: 177 YNFHGDPEAASIVLRRMKC-PITIVPW 202
>AC006801-1|AAF60752.2| 501|Caenorhabditis elegans Hypothetical
protein Y52D5A.2 protein.
Length = 501
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = -1
Query: 699 LHHHMIGLYVHQGVEFGFWVFFAIQMSRSYIQMRKAV 589
+ +H+I L+V+ GV FG V +Q RSY+ +R+A+
Sbjct: 26 IRNHLINLHVYHGVLFGSEVEKILQWDRSYL-VRRAI 61
>Z71262-5|CAA95818.1| 606|Caenorhabditis elegans Hypothetical
protein F22D6.6 protein.
Length = 606
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +1
Query: 610 IGAGHLYSKEDPKP-EFNALMDVEAYHVVMQKADPEKVTILPFSQARLHCNFSASWRKNV 786
I G + +++P F D AYH V + A+ E + P +H +F W+K
Sbjct: 235 IEIGPILERQEPVGISFPEFFDA-AYHQVFEVAERETI---PNEALEIHRSFPTDWKKTS 290
Query: 787 LGAIDTKIMKAQNXHEKISLTXT*NGSHWTQR 882
+ K K + K SL S W R
Sbjct: 291 ISEDQMKEEKEKALFSKNSLIPEMEHSDWDPR 322
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 280 NTDEEQVTINNQQILKLAGRQDIPIYRGSAEALVSPFGNVWYYGLDG 420
NTD Q+T + + RQ +P+YRG G + GL+G
Sbjct: 1161 NTDAHQLTYDEHNPFVVCSRQFVPLYRGRPLCKCPYCGASYSEGLEG 1207
>Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical
protein C07A4.3 protein.
Length = 363
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 487 LIENSKKYEGSLSVVTIGTLTNIAVAMKYDPKFLDRLSHLYI 612
L +NS+K +SV GT+ ++ V +KYDP + S Y+
Sbjct: 305 LWKNSRKIGVGVSVAKRGTMYHVYVCIKYDPPGNMQTSEAYM 346
>U88174-4|AAB42275.1| 280|Caenorhabditis elegans Hypothetical
protein M01A10.3 protein.
Length = 280
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 711 WVSLLHHHMIGLYVHQGVEFGFWVFFAIQMSRSYI 607
WV + H +IG++ G+ F FWV F + ++ Y+
Sbjct: 223 WVPIFHVGLIGIF---GIYFMFWVQFDMFVTLKYL 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,911,195
Number of Sequences: 27780
Number of extensions: 438949
Number of successful extensions: 925
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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