Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_N21
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0044 + 31255284-31256012 32 0.70
10_01_0288 - 2992107-2992627,2992742-2992895 31 0.93
11_06_0610 - 25449085-25453284 30 2.8
04_03_0560 - 17182209-17182493 29 3.8
01_05_0798 - 25322213-25322333,25322536-25322816 29 3.8
03_02_0215 + 6505231-6505554,6506786-6507682 29 5.0
10_08_0267 - 16333239-16333820,16333904-16334842,16334920-163351... 29 6.6
06_03_1339 + 29445324-29445395,29445487-29445598,29445673-294457... 29 6.6
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 29 6.6
03_05_0005 + 19470301-19471180,19471262-19471905,19472027-19472596 29 6.6
11_01_0355 + 2679561-2680985,2681183-2682295 28 8.7
04_03_0671 + 18549252-18549514,18550286-18550354,18550724-185508... 28 8.7
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 28 8.7
>03_06_0044 + 31255284-31256012
Length = 242
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 425 RRRRDGRVVGAEAAAPLEGHVPEVHAVVERGGSQ-AASGELARGRRS 562
RRR GR P+ PE + E GG + +G + RGRRS
Sbjct: 23 RRRSRGRTEAEAVRPPIHAASPEAARLAETGGGERRTAGRIWRGRRS 69
>10_01_0288 - 2992107-2992627,2992742-2992895
Length = 224
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = -2
Query: 512 VPPRHEPLEHDPRAVLRLQHPRHGHLDVGDSPFKSFAIRGRISPSDQPWPGGPRTPTLSS 333
VPP+ EP P+ +HP H+ + F + + P +P P P
Sbjct: 157 VPPKPEPKPEPPKPKPEPEHPFLDHIHKKEKHFFDHFHKKPVPPKPEPKPEPKPQPAPEY 216
Query: 332 HAPS 321
H PS
Sbjct: 217 HNPS 220
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.9 bits (64), Expect = 2.8
Identities = 28/88 (31%), Positives = 37/88 (42%)
Frame = -2
Query: 506 PRHEPLEHDPRAVLRLQHPRHGHLDVGDSPFKSFAIRGRISPSDQPWPGGPRTPTLSSHA 327
P E E P + P H V SP KS P ++P P P TPT++S
Sbjct: 958 PPSEESEPPPSPTPKSSPPSHEEY-VPPSPAKS------TPPPEKPLP--PHTPTINSSP 1008
Query: 326 PSEAHRKMLPTLLSWIRSPSRLSEAPRS 243
PSE M P+ + P+ S+ P S
Sbjct: 1009 PSE-EEYMPPSPVKSSPPPAEKSQPPPS 1035
>04_03_0560 - 17182209-17182493
Length = 94
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 425 RRRRDGRVVGAEAAAPLEGHVPEVHAVVERGGSQAASGELARGRRS-DG*RQQVVR-QNR 598
RRR DGR V P +G V A R + GE+A RR + R + R Q R
Sbjct: 14 RRRGDGRRVAGTGGRPEDG-VALARAAPSRRAGLSGVGEVAANRRKLNCARAEWQRQQRR 72
Query: 599 SDRG 610
+DRG
Sbjct: 73 ADRG 76
>01_05_0798 - 25322213-25322333,25322536-25322816
Length = 133
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 NSQEEDAATDRDN-KSSDKTGAIEERLPKPDTGPETSGDCPPNEED 674
N+QE ++ +D D+ + SD + +E LP P+ + + + PP+++D
Sbjct: 36 NNQESESDSDSDDGQKSDSSD--DEALPVPNPALQANKNVPPSDDD 79
>03_02_0215 + 6505231-6505554,6506786-6507682
Length = 406
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 489 QRFMPWWNAEDRRQLAENSQEEDAATDRDNKSSDKTGAIEERLPKPDTGPETSGDCPPNE 668
QR WW+ + ++ ++ E+ TD++ +S + I E LP PETSG P E
Sbjct: 245 QRRSNWWSPDGSKKRRFHALEQGPVTDQE--TSGRGAHIVEYLPPV---PETSGQVNPVE 299
>10_08_0267 -
16333239-16333820,16333904-16334842,16334920-16335172,
16336837-16337063,16338189-16339388
Length = 1066
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 531 LAENSQEEDAATDRDNKSSDKTGAIEERLPKPDTG 635
L+ N +E+D + DRD + D+T +RLP+ G
Sbjct: 445 LSTNQREDDLSVDRDRSARDETA---DRLPRSGRG 476
>06_03_1339 +
29445324-29445395,29445487-29445598,29445673-29445756,
29446156-29446182,29446879-29446966,29447070-29447151,
29447414-29447434,29448412-29448605,29449419-29449560,
29449805-29449889,29450123-29450250,29450940-29451032,
29451095-29451327,29453384-29453564,29454122-29454169
Length = 529
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 347 PTLSSHAPSEAHRKMLPTLLSWIRSPSRLSEAP 249
P+ +S S +RK+L +L+ W R+SE+P
Sbjct: 7 PSTASPTSSSPYRKLLHSLIYWAVQRCRMSESP 39
>04_04_1183 -
31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 390 TPSNRERFKRRIADVEMAVSWVLKPQHRSRVMFQRFMPWWNAE 518
TP ++ FKR I D ++ W L + ++ RF WN E
Sbjct: 245 TPLMQQGFKRPITDKDI---WKLDSWDETETLYNRFQKCWNNE 284
>03_05_0005 + 19470301-19471180,19471262-19471905,19472027-19472596
Length = 697
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 443 GHLDVGDSPFKSFAIRGRISPSDQPWPGGPRTPTLSSHAPS 321
G D K+ RG S D P+P RT LS APS
Sbjct: 362 GQPDSSIENVKAITTRGGKSTRDPPYPNPTRTNGLSKEAPS 402
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 422 NRRRRDGRVVGAEAAAPLEGHVPEVHAVVERGG 520
N RRR G ++ P+E V EV ++V GG
Sbjct: 335 NTRRRAAAAAGGQSYCPMEHAVMEVSSLVSGGG 367
>04_03_0671 +
18549252-18549514,18550286-18550354,18550724-18550862,
18550993-18551008,18551773-18551821,18552163-18552218,
18552680-18552752,18552838-18552922,18553098-18553130,
18553400-18553481,18553525-18553610,18554050-18554058,
18554522-18554581
Length = 339
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 292 RVGNIFR*ASEGACDESVGVRGPPGQGWSLGEIRPRIAKDLKGES 426
R G + R A D++VG R PG GW + ++ K E+
Sbjct: 2 RCGRVGREGCSPASDDAVGSRRTPGAGWGSAQASGGAIEETKLEA 46
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 28.3 bits (60), Expect = 8.7
Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = -2
Query: 509 PPRHEPLEHDPRAVLRL--QHPRHGHLDVGDSPFKSFAIRGRISPSDQPWPGGPRTPTLS 336
PP P P+A+ + Q+P G L SFA + PS P P P P S
Sbjct: 46 PPSQPP---PPQAMYQAHPQYPMPGSLPPPPPRPPSFAPENALPPSSPP-PPSPPPPPPS 101
Query: 335 SHAPSEAHRKMLPTL-LSWIRSPSR 264
S P PT SW P R
Sbjct: 102 SPPPVPPSPTAAPTTGQSWNSEPER 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,524,953
Number of Sequences: 37544
Number of extensions: 495188
Number of successful extensions: 1874
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1865
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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