Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_N21
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    23   4.9  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    23   4.9  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   6.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   6.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.5  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   8.6  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   8.6  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   8.6  

>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 713 LVSVIVNGSNITRILL 666
           LVS IV+G+N++ +LL
Sbjct: 45  LVSSIVSGANVSAVLL 60


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 713 LVSVIVNGSNITRILL 666
           LVS IV+G+N++ +LL
Sbjct: 45  LVSSIVSGANVSAVLL 60


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 613 DCQNLILVPKLAVTVHQ 663
           DC+N+  VPK+A  +++
Sbjct: 122 DCRNIGAVPKMATELYE 138


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 189 CGEVGELTGLNLRELALA 242
           C ++  L G+NLREL  A
Sbjct: 285 CVKISALKGINLRELTEA 302


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
 Frame = -2

Query: 479 PRAVL--RLQHPRHGHL 435
           P A+L  RL HP HG+L
Sbjct: 349 PSAILAMRLSHPLHGNL 365


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 186 YLQHPXKATNRLYG 145
           +L HP K  N+LYG
Sbjct: 385 HLIHPGKDINKLYG 398


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 186 YLQHPXKATNRLYG 145
           +L HP K  N+LYG
Sbjct: 385 HLIHPGKDINKLYG 398


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 186 YLQHPXKATNRLYG 145
           +L HP K  N+LYG
Sbjct: 323 HLIHPGKDINKLYG 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,716
Number of Sequences: 438
Number of extensions: 4552
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)