Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_N16
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 268 3e-72
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 96 3e-20
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 79 3e-15
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 45 8e-05
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 40 0.002
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 40 0.002
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 39 0.004
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 39 0.005
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 33 0.20
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 31 0.81
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 31 0.81
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.81
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.81
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.81
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.81
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.81
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 31 0.81
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.81
AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical ... 31 0.81
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 31 1.1
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 31 1.1
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 31 1.4
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 30 2.5
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 30 2.5
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 30 2.5
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 30 2.5
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 30 2.5
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 29 4.3
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 29 4.3
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 29 4.3
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 5.7
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical ... 29 5.7
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.7
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 29 5.7
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 28 7.5
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 28 7.5
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 28 7.5
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 28 10.0
AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical ... 28 10.0
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 28 10.0
AC024817-28|AAY86305.1| 103|Caenorhabditis elegans Hypothetical... 28 10.0
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 28 10.0
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 28 10.0
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 268 bits (658), Expect = 3e-72
Identities = 131/202 (64%), Positives = 153/202 (75%)
Frame = +2
Query: 197 KTRRRSMSLRXPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEF 376
K ++ P+R+GKKK+ +KGPDAA KLP VTPH RCRLKLLK ERIKDYLLME+EF
Sbjct: 22 KKEKKKYEAPIPSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEF 81
Query: 377 IRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSF 556
I+NQERLKPQEE+ EEER+KVD+LRGTPM+VG+LEEIIDD HAIVST+VGSEHYV+I+SF
Sbjct: 82 IQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSF 141
Query: 557 VDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMXVSHEA*KGSTGNLC*HWWPGHPDPGNQ 736
VDK+QLEPGCSVLLNHK HAV+GVL DDTDPM + K +
Sbjct: 142 VDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIK 201
Query: 737 GICGVASXHPEYYEEMGIKPPK 802
+ HPEYYEEMGI+PPK
Sbjct: 202 EAVELPLTHPEYYEEMGIRPPK 223
Score = 77.0 bits (181), Expect = 2e-14
Identities = 45/75 (60%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +3
Query: 648 PWXSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRS-HLVRXS 824
P SVMKLEKAPQETYAD+GGLD QIQEIKE+VELPL ++ + L
Sbjct: 172 PMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCP 231
Query: 825 GHW*TLLAKAVANQT 869
G TLLAKAVANQT
Sbjct: 232 GTGKTLLAKAVANQT 246
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 96.3 bits (229), Expect = 3e-20
Identities = 75/205 (36%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Frame = +2
Query: 230 PTRVGKK---KRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQ--ER 394
PT K K +G + A KLP V P +C ++LLK+ RI DYL +E+EFI Q
Sbjct: 15 PTHAAMKIAMKSGRRGIENANKLPTVAPKRQCLVRLLKMNRIHDYLQLEKEFITRQTSRH 74
Query: 395 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD-NHAIVSTSVGS--EHYVSILSFVDK 565
+P + E+ V LRGTP ++ + E+ DD HA+V GS E YV ILS VDK
Sbjct: 75 GRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVE-GSRREWYVPILSIVDK 133
Query: 566 DQLEPGCSVLLN----HKV--HAVVGVLGDDTDPMXVSHEA*KGSTGNLC*HWWPGHPDP 727
D L V++ K A+VGVL D D + H+ K
Sbjct: 134 DLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQ 193
Query: 728 GNQGICGVASXHPEYYEEMGIKPPK 802
+ + HPEYYEEMGI PK
Sbjct: 194 ELKESVELPLTHPEYYEEMGITAPK 218
Score = 58.4 bits (135), Expect = 6e-09
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 666 KLEKAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLVRXS-GHW*TL 842
K+EK P+ET+ DIGG ++QIQE+KESVELPL ++ + ++ G TL
Sbjct: 173 KVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTL 232
Query: 843 LAKAVANQT 869
LAKAVAN T
Sbjct: 233 LAKAVANST 241
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 79.4 bits (187), Expect = 3e-15
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Frame = +2
Query: 320 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDN 499
+KL LER +L + E++I+ + R E+++ + +V ++ P+ +G E +D N
Sbjct: 38 IKLTTLERQLAHLQVMEDYIKLETR--NLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQN 95
Query: 500 HAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTD---PMXVSHEA 670
HAIV ++ GS +YV +LS +D++ L+PGCSV L+ +A+V VL + D M E
Sbjct: 96 HAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEK 155
Query: 671 *KGSTGNLC*HWWPGHPDPGNQGI---CGVASXHPEYYEEMGIKPPK 802
S G++ G D Q + + H E Y+++GI PP+
Sbjct: 156 PDISYGDI------GGLDMQKQEVREAVELPLTHGELYQQIGIDPPR 196
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 660 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXSGHW* 836
+++ ++ P +Y DIGGLD Q QE++E+VELPL ++ + R L+ G
Sbjct: 149 MLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGK 208
Query: 837 TLLAKAVANQT 869
T+LAKAVA T
Sbjct: 209 TMLAKAVAANT 219
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 52.4 bits (120), Expect = 4e-07
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 648 PWXSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXS 824
P S+M +EK P TY +GGLDTQI+EIKE +ELP+ + L+
Sbjct: 138 PLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 197
Query: 825 GHW*TLLAKAVANQT 869
G TLLA+AVA+ T
Sbjct: 198 GTGKTLLARAVAHHT 212
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 52.4 bits (120), Expect = 4e-07
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 648 PWXSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXS 824
P S+M +EK P TY +GGLDTQI+EIKE +ELP+ + L+
Sbjct: 159 PLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 218
Query: 825 GHW*TLLAKAVANQT 869
G TLLA+AVA+ T
Sbjct: 219 GTGKTLLARAVAHHT 233
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 648 PWXSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXS 824
P S+M +EK P TY +GGLD QI+EIKE +ELP+ + L+
Sbjct: 143 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPP 202
Query: 825 GHW*TLLAKAVANQT 869
G TLLA+AVA+ T
Sbjct: 203 GTGKTLLARAVAHHT 217
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 663 MKLEKAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXSGHW*T 839
M++++ P E Y+DIGG D QIQE+ E+V LP+ ++ + + L+ G T
Sbjct: 166 MEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKT 225
Query: 840 LLAKAVANQT 869
++A+AVA QT
Sbjct: 226 MMARAVAAQT 235
Score = 33.1 bits (72), Expect = 0.27
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Frame = +2
Query: 215 MSLRXPTRVGKKKRKAKGPDAALK--LPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQ 388
MS P + GK + DA + L T + R LL E +M E R
Sbjct: 1 MSQTPPPKDGKNPEAMEVEDAIDEEILKMSTEDLKSRTHLLDNE----IRIMRSEVQRIN 56
Query: 389 ERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--DNH----------------AIVS 514
+E+I+E ++ + P V N+ E++D DN A++
Sbjct: 57 HSATTLKERIKENTERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLDAQKTKCAVIK 116
Query: 515 TSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTD 646
TS + +++ ++ VD D+L+PG V +N + ++ L + D
Sbjct: 117 TSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYD 160
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 648 PWXSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXS 824
P ++M++E+ P TY+D+GG QI++++E VE PL + L+
Sbjct: 161 PTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPP 220
Query: 825 GHW*TLLAKAVANQT 869
G TL A+AVAN+T
Sbjct: 221 GTGKTLCARAVANRT 235
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 690 TYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXSGHW*TLLAKAVANQ 866
+Y+D+GGL QI+E++E VELPL K+ + L+ G TLLA+AVA+Q
Sbjct: 140 SYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQ 199
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 690 TYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXSGHW*TLLAKAVANQ 866
+Y+D+GGL QI+E++E VELPL K+ + L+ G TLLA+AVA+Q
Sbjct: 148 SYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQ 207
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 672 EKAPQET-YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXSGHW*TLL 845
E+A E Y D+GG+ Q+ +IKE VELPL K R L+ G TL+
Sbjct: 200 EEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLI 259
Query: 846 AKAVANQT 869
A+AVAN+T
Sbjct: 260 ARAVANET 267
Score = 35.5 bits (78), Expect = 0.050
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 675 KAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLVRXS-GHW*TLLAK 851
+ P T++DIGGL +E++E V+ P+ K+ R L G TLLAK
Sbjct: 475 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 534
Query: 852 AVANQ 866
A+AN+
Sbjct: 535 AIANE 539
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 784 GNQTSXGVILYGPPGTGK 837
G Q S GV+ YGPPG GK
Sbjct: 512 GMQPSRGVLFYGPPGCGK 529
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 672 EKAPQET-YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXSGHW*TLL 845
E+A E Y D+GG+ Q+ +IKE VELPL K R L+ G TL+
Sbjct: 200 EEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLI 259
Query: 846 AKAVANQT 869
A+AVAN+T
Sbjct: 260 ARAVANET 267
Score = 35.5 bits (78), Expect = 0.050
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 675 KAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLVRXS-GHW*TLLAK 851
+ P T++DIGGL +E++E V+ P+ K+ R L G TLLAK
Sbjct: 475 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 534
Query: 852 AVANQ 866
A+AN+
Sbjct: 535 AIANE 539
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 784 GNQTSXGVILYGPPGTGK 837
G Q S GV+ YGPPG GK
Sbjct: 512 GMQPSRGVLFYGPPGCGK 529
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 693 YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLV-RXSGHW*TLLAKAVANQT 869
Y D+GG+ Q+ +IKE VELPL K R L+ G TL+A+AVAN+T
Sbjct: 209 YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANET 268
Score = 35.5 bits (78), Expect = 0.050
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 675 KAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLVRXS-GHW*TLLAK 851
+ P T++DIGGL +E++E V+ P+ K+ R L G TLLAK
Sbjct: 476 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 535
Query: 852 AVANQ 866
A+AN+
Sbjct: 536 AIANE 540
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 784 GNQTSXGVILYGPPGTGK 837
G Q S GV+ YGPPG GK
Sbjct: 513 GMQPSRGVLFYGPPGCGK 530
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +2
Query: 149 EWVKINQVEVVTKKMTKTRRRSMSLRXPT-RVGKKKRKAKGPDAALKLPQVTPHTRCRLK 325
E K + E +K+ R+R +++ RV ++ K K + LK +
Sbjct: 885 EKCKEKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVEKEKV 944
Query: 326 LLKLERIKDYLLMEEEFIR-NQERLKPQEEKIEEERSKV 439
+ E++K +E ++ +ERLK +EEK++ E+ KV
Sbjct: 945 KAEEEKVKVEKERNKEKVKAEEERLKAEEEKVKIEKEKV 983
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +2
Query: 245 KKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE-RLKPQEEKIE 421
+++ K K +A + ++ P R R++ +K E ++ + E E ++ +E RLK +EEK++
Sbjct: 882 RREEKCKEKEAEEENEKLIPE-RKRMEAIKEE--EERVKAEREKVKKEEERLKAEEEKVK 938
Query: 422 EERSKV 439
E+ KV
Sbjct: 939 VEKEKV 944
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +2
Query: 140 IDSEWVKINQVEVVTKKMTKTRRRSMSLRXPTRVGKKKRKAKGPDAAL-KLPQVTPHTRC 316
+ ++W I QV + MT+ + L P + + ++ + PD K+ + +
Sbjct: 3275 VGTDWKAIRQVMMKDDFMTRILQFDTELLTPEILKQMEKYIQNPDWEFDKVNRASVACGP 3334
Query: 317 RLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM--SVGNLEE 484
+K + + + +L + E +RN+ + QE + + KV D+R T + S+G +E
Sbjct: 3335 MVKWARAQLLYSTMLHKVEPLRNELKRLEQEAAKKTQEGKVVDVRITELEESIGKYKE 3392
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +2
Query: 140 IDSEWVKINQVEVVTKKMTKTRRRSMSLRXPTRVGKKKRKAKGPDAAL-KLPQVTPHTRC 316
+ ++W I QV + MT+ + L P + + ++ + PD K+ + +
Sbjct: 3275 VGTDWKAIRQVMMKDDFMTRILQFDTELLTPEILKQMEKYIQNPDWEFDKVNRASVACGP 3334
Query: 317 RLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM--SVGNLEE 484
+K + + + +L + E +RN+ + QE + + KV D+R T + S+G +E
Sbjct: 3335 MVKWARAQLLYSTMLHKVEPLRNELKRLEQEAAKKTQEGKVVDVRITELEESIGKYKE 3392
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 359 LMEEEFIRNQERLKPQEEKIEEERSKVDD 445
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 359 LMEEEFIRNQERLKPQEEKIEEERSKVDD 445
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 359 LMEEEFIRNQERLKPQEEKIEEERSKVDD 445
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 359 LMEEEFIRNQERLKPQEEKIEEERSKVDD 445
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 359 LMEEEFIRNQERLKPQEEKIEEERSKVDD 445
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 359 LMEEEFIRNQERLKPQEEKIEEERSKVDD 445
L+EEE R +ERLK EK+EE VD+
Sbjct: 3 LLEEELERAEERLKIATEKLEEATHNVDE 31
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 359 LMEEEFIRNQERLKPQEEKIEEERSKVDD 445
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical
protein Y54F10BM.3 protein.
Length = 745
Score = 31.5 bits (68), Expect = 0.81
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +2
Query: 95 LKYLF*NSINLGTCGIDSEWVKINQVEVVTKKMTKTRRRSMSLRXPTRVG-KKKRKAKGP 271
L LF S +G G W K+ Q +KM + + L + V K R A G
Sbjct: 192 LVVLFLESAFVGAFGAYCYW-KVQQWR--DEKMAREKAWERRLARVSEVSASKNRNAGGV 248
Query: 272 DAALKLPQVTPHTRCRLKLLKLERIKDYLL-MEEEFIRNQERL-KPQEEKIEEE 427
D A K P+ + +K + L+R LL ME+ ++N+E+ KPQ E E E
Sbjct: 249 DPA-KRPRESAKWLKHVKEVTLKRGGVELLPMEDVIVKNKEKFKKPQNELRENE 301
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 197 KTRRRSMSLRXPTRVGKKKRKAKGPDAALKLPQVTPHTRCRL-KLLKLERIKDYLLMEEE 373
K RRR R + +R A+ L+ ++ R R + L+ R+ +L + E
Sbjct: 310 KDRRREDRERKRREKRELERMAEEEKKRLEKERLEAEQRSRATRRLQGVRLLKFLFEKIE 369
Query: 374 FIRNQERLKPQEEKIEEERSKVDDLRGTPM 463
R + R + +EEK+++E SK+ +L P+
Sbjct: 370 -AREERRKRKEEEKLKDELSKIKELEEQPV 398
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 197 KTRRRSMSLRXPTRVGKKKRKAKGPDAALKLPQVTPHTRCRL-KLLKLERIKDYLLMEEE 373
K RRR R + +R A+ L+ ++ R R + L+ R+ +L + E
Sbjct: 310 KDRRREDRERKRREKRELERMAEEEKKRLEKERLEAEQRSRATRRLQGVRLLKFLFEKIE 369
Query: 374 FIRNQERLKPQEEKIEEERSKVDDLRGTPM 463
R + R + +EEK+++E SK+ +L P+
Sbjct: 370 -AREERRKRKEEEKLKDELSKIKELEEQPV 398
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +2
Query: 242 GKKKRKAKGPDAALKLPQVTPH-TRCRLKLLKLERIKDYL-LMEEEFIRN--QERLKPQE 409
GKK++ A Q T T K+L +I++Y E E + N ++ +
Sbjct: 747 GKKEKAAPSTVPGASRSQSTKSSTEIPTKILGANKIREYEPANENEQLMNLKKQEVTGLP 806
Query: 410 EKIEEERSKVDDLRGTPMSVGNLEEI 487
EKI++ RS++DD+R + + N+ E+
Sbjct: 807 EKIDQLRSRLDDIR---VGIANMHEV 829
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 693 YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHL-VRXSGHW*TLLAKAVANQ 866
+ +GGL IQ +KE V P+ +K+ N + + G TL+A+A+AN+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANE 448
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 802 GVILYGPPGTGK 837
GV+ YGPPGTGK
Sbjct: 427 GVVFYGPPGTGK 438
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 693 YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHL-VRXSGHW*TLLAKAVANQ 866
+ +GGL IQ +KE V P+ +K+ N + + G TL+A+A+AN+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANE 446
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 802 GVILYGPPGTGK 837
GV+ YGPPGTGK
Sbjct: 425 GVVFYGPPGTGK 436
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 693 YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHL-VRXSGHW*TLLAKAVANQ 866
+ +GGL IQ +KE V P+ +K+ N + + G TL+A+A+AN+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANE 448
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 802 GVILYGPPGTGK 837
GV+ YGPPGTGK
Sbjct: 427 GVVFYGPPGTGK 438
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 693 YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHL-VRXSGHW*TLLAKAVANQ 866
+ +GGL IQ +KE V P+ +K+ N + + G TL+A+A+AN+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANE 448
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 802 GVILYGPPGTGK 837
GV+ YGPPGTGK
Sbjct: 427 GVVFYGPPGTGK 438
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 693 YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHL-VRXSGHW*TLLAKAVANQ 866
+ +GGL IQ +KE V P+ +K+ N + + G TL+A+A+AN+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANE 446
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 802 GVILYGPPGTGK 837
GV+ YGPPGTGK
Sbjct: 425 GVVFYGPPGTGK 436
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 693 YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHL-VRXSGHW*TLLAKAVANQ 866
+ +GGL IQ +KE V P+ +K+ N + + G TL+A+A+AN+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANE 448
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 802 GVILYGPPGTGK 837
GV+ YGPPGTGK
Sbjct: 427 GVVFYGPPGTGK 438
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 693 YADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHL-VRXSGHW*TLLAKAVANQ 866
+ +GGL IQ +KE V P+ +K+ N + + G TL+A+A+AN+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANE 448
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 802 GVILYGPPGTGK 837
GV+ YGPPGTGK
Sbjct: 427 GVVFYGPPGTGK 438
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 778 RNGNQTSXGVILYGPPGTGK 837
R G + GV+L GPPGTGK
Sbjct: 228 RLGGRLPKGVLLVGPPGTGK 247
>Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical
protein W02A2.6 protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 323 KLLKLERIKDY-LLMEEEFIRNQERLKPQEEKIEEERSK 436
KL +L + K + LLM E F RNQE L+ +E+K RSK
Sbjct: 89 KLKELMKKKSFILLMAERFDRNQE-LQRKEDKFARLRSK 126
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 158 KINQVEVVTKKMTKTRRRSMSLRXPT-RVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLK 334
K + E +K+ R R +++ RV ++ K K + LK + ++K+ K
Sbjct: 863 KEKEAEEENEKLIAERERMRAIKEEEERVKAEREKVKKEEERLKAEEE------KVKVEK 916
Query: 335 LERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 439
ER K+ + EEE RLK +EEK++ E+ KV
Sbjct: 917 -ERNKEKVKAEEE------RLKAEEEKVKIEKEKV 944
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 356 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 496
+L+EE+ R ++RLK K+E+ D+ + ++ N ++ DD
Sbjct: 65 VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 356 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 496
+L+EE+ R ++RLK K+E+ D+ + ++ N ++ DD
Sbjct: 65 VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 748 SCLXPSGIL*RNGNQTSXGVILYGPPGTGK 837
S + P + + G + G++L+GPPGTGK
Sbjct: 314 SRVFPPEFIEQLGMKHVRGILLFGPPGTGK 343
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/105 (21%), Positives = 43/105 (40%)
Frame = +2
Query: 134 CGIDSEWVKINQVEVVTKKMTKTRRRSMSLRXPTRVGKKKRKAKGPDAALKLPQVTPHTR 313
C + E V + + K++ + P + +KK + + + K +
Sbjct: 261 CSLQKENVHCTILRINHKEVAEKNEEDKKEEEPKKEEEKKEEVEKKEEDEKKDEEPKKEE 320
Query: 314 CRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDL 448
+ K E K+ + +EE + E K +EEK EEE K D++
Sbjct: 321 EK----KEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEV 361
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 748 SCLXPSGIL*RNGNQTSXGVILYGPPGTGK 837
S + P + + G + G++L+GPPGTGK
Sbjct: 314 SRVFPPEFIEQLGMKHVRGILLFGPPGTGK 343
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 748 SCLXPSGIL*RNGNQTSXGVILYGPPGTGK 837
S + P + + G + G++L+GPPGTGK
Sbjct: 248 SRVFPPEFIEQLGMKHVRGILLFGPPGTGK 277
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 284 KLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQ-EEKIEEERSKVDDLR 451
KL Q+ R++ L+ ++ + M E+ + E +K Q E+K+ E R ++DDL+
Sbjct: 1447 KLTQLRNELTARIEQLESQKSNEQAQMSEK-LSQVESMKVQIEQKLYETREELDDLK 1502
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 332 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 496
KL+ K+ L E+ R Q+ K + ++ S +DD + LEE++D+
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 332 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 496
KL+ K+ L E+ R Q+ K + ++ S +DD + LEE++D+
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261
>AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical
protein C17E7.5 protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 269 PDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEF 376
PDA L+L Q++P R++ L + ++ + + +EEF
Sbjct: 240 PDAILRLKQISPQFLQRIRSLLVMKLIELKITDEEF 275
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1
Query: 802 GVILYGPPGTGK 837
GV+L+GPPGTGK
Sbjct: 351 GVLLFGPPGTGK 362
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 407 EEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ-LEPG 583
EE +E E +DD+ + GNLE D + S+ +E ++ +V++ + L G
Sbjct: 2739 EETVETEEMIMDDMMDLYYTPGNLEIARDTFDKLEIASIMNEILYTVDQYVEETEILFRG 2798
Query: 584 CSVLLNHKVHAVVGV 628
S + + AV+ +
Sbjct: 2799 ASTAADRQAFAVMSI 2813
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 802 GVILYGPPGTGKHSW 846
G + YGPPGTGK S+
Sbjct: 199 GYLFYGPPGTGKSSF 213
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 802 GVILYGPPGTGKHSW 846
G + YGPPGTGK S+
Sbjct: 245 GYLFYGPPGTGKSSF 259
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 802 GVILYGPPGTGK 837
G++L+GPPGTGK
Sbjct: 153 GILLFGPPGTGK 164
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 787 NQTSXGVILYGPPGTGK 837
N+T ++ YGPPGTGK
Sbjct: 59 NRTLPHLLFYGPPGTGK 75
>AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical
protein T24E12.3 protein.
Length = 288
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 368 EEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 496
++F+ NQE+L +EKI+ ++ + D + S G+ E + D
Sbjct: 236 QKFLNNQEKLNEDQEKIKNDKER-DSISQVENSDGSSESGLAD 277
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 27.9 bits (59), Expect = 10.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +3
Query: 675 KAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLVRXSGHW*TLLAKA 854
K P + D+GGL+ Q + ES+ L +K+ S + L G TL+AKA
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRTNLFGSRALKR--SGII---LYGSPGCGKTLIAKA 512
Query: 855 VANQ 866
VA +
Sbjct: 513 VATE 516
>AC024817-28|AAY86305.1| 103|Caenorhabditis elegans Hypothetical
protein Y54G2A.49 protein.
Length = 103
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 185 KKMTKTRR-RSMSLRXPTRVGKKKRKAKGP-DAALKLP 292
KK KT++ R + P+R +K+R+ GP DA K+P
Sbjct: 33 KKRRKTKKHRKRRKKKPSRGSRKRREEDGPVDAPRKIP 70
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 27.9 bits (59), Expect = 10.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +3
Query: 675 KAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLVRXSGHW*TLLAKA 854
K P + D+GGL+ Q + ES+ L +K+ S + L G TL+AKA
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRTNLFGSRALKR--SGII---LYGSPGCGKTLIAKA 512
Query: 855 VANQ 866
VA +
Sbjct: 513 VATE 516
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 27.9 bits (59), Expect = 10.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +3
Query: 675 KAPQETYADIGGLDTQIQEIKESVELPLXIRNTMKKWESNLXRSHLVRXSGHW*TLLAKA 854
K P + D+GGL+ Q + ES+ L +K+ S + L G TL+AKA
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRTNLFGSRALKR--SGII---LYGSPGCGKTLIAKA 512
Query: 855 VANQ 866
VA +
Sbjct: 513 VATE 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,779,057
Number of Sequences: 27780
Number of extensions: 352814
Number of successful extensions: 1306
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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