Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_N15
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF266280-2|AAG44702.1|   97|Homo sapiens mitogaligin protein.          33   1.9  
AB209253-1|BAD92490.1|  458|Homo sapiens two pore segment channe...    32   3.3  
AY396742-1|AAR91620.1|  784|Homo sapiens repetin protein.              30   10.0 
AY219924-1|AAP48705.1|  784|Homo sapiens repetin protein.              30   10.0 

>AF266280-2|AAG44702.1|   97|Homo sapiens mitogaligin protein.
          Length = 97

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +2

Query: 431 RSVPWTVSSVRAMRALWSMRALRPMWAL-RSVSIPLPVWSMRALWALSIPGPLWSLWSLW 607
           R + WT +S R   + WS+      W+L R+   P   W +   W    P  L   W LW
Sbjct: 31  RGLSWTGTSRRLPWSTWSLSRSTCTWSLPRATQRP---WGLPIFWTAKCPRSLPCHWPLW 87


>AB209253-1|BAD92490.1|  458|Homo sapiens two pore segment channel 2
           variant protein.
          Length = 458

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 22/71 (30%), Positives = 37/71 (52%)
 Frame = +2

Query: 404 MSMWSLWAVRSVPWTVSSVRAMRALWSMRALRPMWALRSVSIPLPVWSMRALWALSIPGP 583
           + + SLW +  +   +   R +R + SM+   PM  + S  + L V +MRA   + +PGP
Sbjct: 382 VGLLSLWDMTRMLNMLIVFRFLRIIPSMK---PMAVVASTVLGL-VQNMRAFGGILVPGP 437

Query: 584 LWSLWSLWSVR 616
              L +LW +R
Sbjct: 438 CQWLGALWELR 448


>AY396742-1|AAR91620.1|  784|Homo sapiens repetin protein.
          Length = 784

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = -1

Query: 633 RMVRKVRTDHRDHRDHKGPGIDKAHKARM---DHTGKGIDTDRKAHMGRKARMDHKARMA 463
           +M RK +  H D  + +G G   +   R     H G+    D+ +H G+  R D  +   
Sbjct: 345 QMDRKGQCYHYDQTNRQGQGSHYSQPNRQGQSSHYGQPDTQDQSSHYGQTDRQDQSSHYG 404

Query: 462 RTEDTVQGTDRTAHKDHMDIRXLG 391
           +TE   QG  +++H   MD +  G
Sbjct: 405 QTER--QG--QSSHYSQMDRQGQG 424


>AY219924-1|AAP48705.1|  784|Homo sapiens repetin protein.
          Length = 784

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = -1

Query: 633 RMVRKVRTDHRDHRDHKGPGIDKAHKARM---DHTGKGIDTDRKAHMGRKARMDHKARMA 463
           +M RK +  H D  + +G G   +   R     H G+    D+ +H G+  R D  +   
Sbjct: 345 QMDRKGQCYHYDQTNRQGQGSHYSQPNRQGQSSHYGQPDTQDQSSHYGQTDRQDQSSHYG 404

Query: 462 RTEDTVQGTDRTAHKDHMDIRXLG 391
           +TE   QG  +++H   MD +  G
Sbjct: 405 QTER--QG--QSSHYSQMDRQGQG 424


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,041,277
Number of Sequences: 237096
Number of extensions: 2076455
Number of successful extensions: 5558
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5539
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)