Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_N12
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 34 0.13
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858... 33 0.23
10_07_0039 - 12269928-12270103,12270871-12271015,12271066-122710... 33 0.30
08_02_0888 - 22284554-22285144 32 0.53
03_05_1074 + 30168065-30168577 32 0.70
11_08_0048 - 28022335-28022520,28022607-28022699,28022804-280228... 31 1.2
04_04_1375 + 33040329-33040854,33041611-33041838,33041984-330420... 30 2.1
08_02_1583 + 28036125-28037030,28037411-28037656 30 2.8
07_03_0288 + 16285485-16285721,16285811-16286184,16286499-162868... 30 2.8
11_06_0168 + 20868696-20870072 29 4.9
09_03_0040 + 11816056-11819069,11819837-11820428 29 4.9
05_03_0134 + 8790409-8790421,8790716-8791023,8791836-8792153,879... 29 4.9
05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335 29 4.9
10_08_0825 + 20831170-20831349,20831380-20831547,20831627-208316... 29 6.5
10_07_0017 - 11832733-11832963,11835172-11835550,11836466-11836704 29 6.5
09_06_0081 + 20745627-20748144,20748211-20748308 29 6.5
03_01_0381 - 2960533-2960805 29 6.5
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 29 6.5
02_01_0353 + 2545982-2549833 29 6.5
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 29 6.5
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721... 28 8.6
04_04_0977 + 29851086-29851463,29852054-29852551,29853665-298537... 28 8.6
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 28 8.6
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = +1
Query: 340 NTGTSDPRFLVGGNGKVYEGSGWLHVGAHTYGYNSRSIGVAFIGNFNTDEPS----GAML 507
NTG S +GG G+++ G W + Y S S +A G + ++PS + L
Sbjct: 385 NTGYSFVNCSIGGTGRIWLGRAWRPYSTVVFAYTSMSDIIASEGWNDWNDPSRDQYASSL 444
Query: 508 EALRSLLRCGVERGHLAGDYRVVAHRQLIASESPGRKLYNQIRRWP 645
++ S++ C +R G+YR ++ P + + ++ P
Sbjct: 445 YSV-SIVTCMTKRTVFYGEYRCTGDGANLSDRVPYAQKLSDVQVLP 489
>07_03_0446 -
18285132-18285221,18285437-18285499,18285805-18285867,
18286079-18286129,18286413-18286506,18286696-18286856,
18287089-18287145,18287380-18287493,18287934-18287999,
18288063-18288266,18289207-18289284,18289669-18289788,
18290425-18290491,18290635-18290735,18290820-18290936,
18292024-18292107,18292181-18292309,18292385-18292510,
18292622-18292696,18292814-18292947,18293032-18293137,
18293220-18293276,18294387-18294573,18295244-18295407,
18296129-18296353,18296538-18296744,18297043-18297375,
18297604-18297993
Length = 1220
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2
Query: 327 CGWSGYSAPAPRSQRPSCR 271
CG+ GYS PAP++ RPSCR
Sbjct: 63 CGY-GYSTPAPKAPRPSCR 80
>10_07_0039 -
12269928-12270103,12270871-12271015,12271066-12271094,
12271394-12271478
Length = 144
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 200 DPGARVVPGAAREPRHRPAHSHTL 271
D G R VPG + PRHRP H T+
Sbjct: 81 DGGRRAVPGQSTVPRHRPRHDPTI 104
>08_02_0888 - 22284554-22285144
Length = 196
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 419 PTCSQPEPSYTLPLPPTRXRGSDVPVLQGLH 327
P QPEPS P P +G+DVPV+ H
Sbjct: 29 PMPDQPEPSQPEPSQPEESKGADVPVMVRTH 59
>03_05_1074 + 30168065-30168577
Length = 170
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -2
Query: 543 LHAAAQQRPQRLQHRAARLVRVEVADECDSDGPRVVPVGVRADVQPAGA 397
L AA ++RP + + AA VR A D DGP V P + P A
Sbjct: 95 LPAAMRRRPLQAEEMAALAVRASAALVGDHDGPLVFPEAAASAADPRAA 143
>11_08_0048 -
28022335-28022520,28022607-28022699,28022804-28022882,
28022951-28023061,28023133-28023390,28023468-28023970,
28024094-28024729,28024778-28025116
Length = 734
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 407 QPEPSYTLPLPPTRXRGSDVPVLQGLH 327
QPEPS P P +G+DVPV+ H
Sbjct: 330 QPEPSQLEPSQPEELKGADVPVMVRTH 356
>04_04_1375 +
33040329-33040854,33041611-33041838,33041984-33042081,
33042406-33042450,33042678-33042846,33042917-33043026,
33043983-33044051,33044085-33044158,33044738-33044804,
33044876-33044988,33045148-33045237,33046030-33046144,
33046230-33046388
Length = 620
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/86 (27%), Positives = 36/86 (41%)
Frame = -3
Query: 563 SPARWPRSTPQRSSDRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTL 384
+P R P ++DRSAS +A S + + + + P P PS+ L
Sbjct: 70 TPTPPKRRPPPVAADRSASVVADTPRSFVPCSLRNRAIAGD------TPDSVLPSPSFHL 123
Query: 383 PLPPTRXRGSDVPVLQGLHVVGLDIP 306
P + GSDVP GL + + P
Sbjct: 124 DAPDSATPGSDVPCSVGLDDIVPETP 149
>08_02_1583 + 28036125-28037030,28037411-28037656
Length = 383
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -3
Query: 425 CAPTCSQPEPSYTLPLPPTRXRGSDVPVLQGLHVVGLDIPHQLLAASVRPAEG 267
C P C QPE TL +PP G VLQ V GL + H +V P G
Sbjct: 242 CYPECPQPE--LTLGMPPHSDYGFLTLVLQD-EVAGLQVMHAGEWLTVDPLPG 291
>07_03_0288 +
16285485-16285721,16285811-16286184,16286499-16286892,
16286917-16287806,16291189-16291446,16291518-16291628,
16291697-16291775,16291880-16291972,16292095-16292280
Length = 873
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 419 PTCSQPEPSYTLPLPPTRXRGSDVPVLQGLH 327
P QPE S + P P +G+DVPV+ H
Sbjct: 529 PMPDQPEQSQSEPSQPEEPKGADVPVMVRTH 559
>11_06_0168 + 20868696-20870072
Length = 458
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 428 VCAPTCSQPEPSYTLPLPPTRXRGSDVP--VLQGLHVVGLDIPHQLLAASV 282
+C P CS E T+ T SD+P +L + + L+IP L AASV
Sbjct: 29 LCLPPCSTKEELRTILTETTAREFSDLPHDILMDI-IAMLEIPDALRAASV 78
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 530 RSSDRSASSIAPLGSSVLKLPMNATPMDL 444
R R+AS++A G+S+ +LP+ ATP+ +
Sbjct: 301 RDCGRAASTLAESGASMEELPLEATPISV 329
>05_03_0134 +
8790409-8790421,8790716-8791023,8791836-8792153,
8793021-8793212,8793383-8793618,8793696-8793953,
8794237-8794315,8797728-8797895
Length = 523
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 548 PRSTPQRSSDRSASSIAPLGS--SVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPLP 375
PRS + S+ + ++P + P ++E P P +QP+PS
Sbjct: 208 PRSRKWQQSELAIQEVSPTQQLETAQSEPKKQAEGEIEEVPEQAMP--NQPKPSQLEQSQ 265
Query: 374 PTRXRGSDVPVLQG 333
P +G++VPV+ G
Sbjct: 266 PEEPKGANVPVMNG 279
>05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335
Length = 377
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3
Query: 230 PRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 120
P+ VR V R +TVP+ +TD A G EK E E E
Sbjct: 120 PKFVR-VLRPKTVPIRYTDTFASGTVALEKELEKEFE 155
>10_08_0825 +
20831170-20831349,20831380-20831547,20831627-20831698,
20831997-20832075,20832182-20832375,20832469-20832558,
20832851-20832940,20833196-20833282,20833477-20833560,
20833690-20833809,20834096-20834103,20834443-20834575,
20835044-20835125,20835330-20835496,20836006-20836493,
20836551-20836638,20836716-20836818,20836932-20837083,
20837191-20837316,20837459-20837529,20837691-20837753,
20838418-20838490,20838972-20839040,20839180-20839257,
20839434-20839484,20839586-20839696
Length = 1008
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 446 LELYP*VCAPTCSQPE-PSYTLPLPPTRXRGSDVPVLQGLHV 324
L L P P S+PE P++ LP PP+ S PVL + V
Sbjct: 20 LGLLPPTPPPPASRPEVPNHFLPPPPSSISHSVYPVLDPIEV 61
>10_07_0017 - 11832733-11832963,11835172-11835550,11836466-11836704
Length = 282
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 95 ARLRLGSCTRARSQLASHRNSSRLRRRQ*KAMGRFDPGARVVPGAAREPRHRPAHSHTLL 274
A RLG A +++ + R S+ + K GRF PG ++ G R+ R + H +
Sbjct: 11 AAARLGRHVAAATRMTT-RLSTTHGNKTLKTRGRFSPGNKIGKGTRRQ-RRQSGGKHKID 68
Query: 275 QDG 283
DG
Sbjct: 69 DDG 71
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = -3
Query: 521 DRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPLPPTRXRGSDVPV 342
D ++SS A + L + A L + P + P P+ +P+PPT R P
Sbjct: 316 DGASSSFATPRMRTISLALRAPAPHLRAPRTLAPPAPTPPAPATPVPMPPTPTRLVPTPP 375
Query: 341 LQGLHVVGLDIPHQLLAA--SVRPAEGCD 261
G D+P + + + RP+ G D
Sbjct: 376 APG---PPADVPPRFTVSPTTTRPSFGYD 401
>03_01_0381 - 2960533-2960805
Length = 90
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 221 VRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 120
+R R +TVP+ +TD A G EK E E E
Sbjct: 1 MRRSQRPKTVPIRYTDTFASGTIALEKELEKEFE 34
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +2
Query: 296 GAGAEYPDQPHGGLAILGHRTLXSWWEVTARCTRAPAGCTSARTPTGTTRGPS 454
GA P P G + + W E A A G T A TP G T GP+
Sbjct: 258 GAWDATPKLPGGLVTPTPKKQRSRWDETPASMGSATPGGTGAATPAGYTPGPT 310
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +2
Query: 296 GAGAEYPDQPHGGLAILGHRTLXSWWEVTARCTRAPAGCTSARTPTGTTRGPS 454
GA P P G + + W E A A G T A TP G T GP+
Sbjct: 282 GAWDATPKLPGGLVTPTPKKQRSRWDETPASMGSATPGGTGAATPAGYTPGPT 334
>01_03_0303 +
14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 355 PMSQYCKASMWLVWIFRTSSSQPASV-LQKGVTVCWTMTRLTGRAR 221
P+ +YC +W +WI ++ QP V Q+ + W+ GRA+
Sbjct: 816 PLVKYCPPELWRMWI--SNLLQPLFVHCQQALDFSWSSLLREGRAK 859
>12_01_0790 +
7216452-7216489,7216664-7216722,7217268-7218750,
7218828-7218892,7219023-7219080,7219152-7219262,
7219332-7219410,7219521-7219613,7219701-7219886
Length = 723
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = -3
Query: 548 PRSTPQRSSDRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPLPPT 369
P P +S R+ SV P ++E P P QPE S P P
Sbjct: 319 PVPEPPVASPRTKKDAEEPSESVQAEPTKLAAGEIEAVP--DQPMPDQPEQSQPEPSQPE 376
Query: 368 RXRGSDVPVLQGLH 327
+G+DV V+ H
Sbjct: 377 EPKGADVLVMVRTH 390
>04_04_0977 +
29851086-29851463,29852054-29852551,29853665-29853754,
29854369-29854491
Length = 362
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -2
Query: 642 PASYLVVELPAGALRGNELSVRHDAVVPREVAALHAAAQQRPQRLQHRAAR 490
PAS+L AG G E V+ A EV L AQQ +R + R AR
Sbjct: 32 PASFLFGNNNAGGAAGTETRVQVAAGAVPEVDQLLKQAQQPGRRKRRRRAR 82
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 49 ALPRADVLARAAPRHGPPPTRQLYSRSLS 135
ALP A A AAP+ PP L++RS++
Sbjct: 31 ALPDASAAAAAAPQQPPPLAGTLWARSMA 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,543,543
Number of Sequences: 37544
Number of extensions: 534534
Number of successful extensions: 2298
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2294
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -