Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_N12
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024810-19|AAF60770.1|  427|Caenorhabditis elegans Hypothetical...    29   3.3  
Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z49072-4|CAA88882.4|  414|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astaci...    29   5.8  

>AC024810-19|AAF60770.1|  427|Caenorhabditis elegans Hypothetical
           protein Y54E10A.16a protein.
          Length = 427

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = -3

Query: 281 RPAEGCDCVLDDDEAHGPRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESEREYNCRVG 102
           RP  G   +LD+ E  GP +V +V+ D  +      D  +G  F  +         CRV 
Sbjct: 97  RPDRGKFTILDNAEVAGPEEVLNVNFDSEILQRIFSDPKLGIQFLARYGLIPNTRVCRVQ 156

Query: 101 GGP 93
             P
Sbjct: 157 DCP 159


>Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical
           protein C25F9.5 protein.
          Length = 707

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 764 RVILYELTLVQDLNTTR-TALCDTL**CYAFLMESTFSSHS 645
           R+ILYE   + D+NT R  A+C+ L   Y + +   F  HS
Sbjct: 128 RIILYEANKISDINTLRFGAICE-LKSKYRWCLTENFKQHS 167


>Z49072-4|CAA88882.4|  414|Caenorhabditis elegans Hypothetical
           protein T24A11.3 protein.
          Length = 414

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -3

Query: 230 PRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESEREYNCRVGGGP 93
           P+++++V    T  + F D   I   +C    +     NC  GG P
Sbjct: 236 PKELKYVTTMGTEKMAFLDAKVINDIYCPNACQGRNHLNCLAGGYP 281


>U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astacin
           protease protein 7 protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 301 SSSQPASVLQKGVTVC-WTMTRLTGRARYDTCTGIKPSHC 185
           +S++P+S  +  +TVC WT  R    A Y   + + P  C
Sbjct: 340 NSNKPSSQCEDRITVCWWTADRCRSPAIYQVMSSLCPKTC 379


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,420,861
Number of Sequences: 27780
Number of extensions: 379776
Number of successful extensions: 1335
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)