Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_N11
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    83   5e-16
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    83   5e-16
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    83   5e-16
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    83   7e-16
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    83   7e-16
AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p pro...    30   4.9  
AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p pro...    30   4.9  
AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB...    30   4.9  
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    29   6.5  
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    29   6.5  
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    29   6.5  
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    29   6.5  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 83.0 bits (196), Expect = 5e-16
 Identities = 39/57 (68%), Positives = 46/57 (80%)
 Frame = +3

Query: 135 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 305
           GK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVGGG
Sbjct: 14  GKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 83.0 bits (196), Expect = 5e-16
 Identities = 39/57 (68%), Positives = 46/57 (80%)
 Frame = +3

Query: 135 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 305
           GK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVGGG
Sbjct: 14  GKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 83.0 bits (196), Expect = 5e-16
 Identities = 39/57 (68%), Positives = 46/57 (80%)
 Frame = +3

Query: 135 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 305
           GK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVGGG
Sbjct: 14  GKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 39/57 (68%), Positives = 45/57 (78%)
 Frame = +3

Query: 135 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 305
           GK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVGGG
Sbjct: 14  GKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 39/57 (68%), Positives = 45/57 (78%)
 Frame = +3

Query: 135 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 305
           GK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVGGG
Sbjct: 14  GKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70


>AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p
           protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -3

Query: 304 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 149
           PPP GI++   + + +     LPL+ + T  + S S++  T   I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460


>AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p
           protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -3

Query: 304 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 149
           PPP GI++   + + +     LPL+ + T  + S S++  T   I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308


>AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB
           protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -3

Query: 304 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 149
           PPP GI++   + + +     LPL+ + T  + S S++  T   I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 245 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 135
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 245 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 135
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 245 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 135
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 245 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 135
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,114,056
Number of Sequences: 53049
Number of extensions: 467084
Number of successful extensions: 1217
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)