Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_N11
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    54   1e-07
AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    52   6e-07
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    33   0.36 
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    33   0.36 
AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical ...    32   0.63 
AF016673-5|AAB66123.1|  684|Caenorhabditis elegans Hypothetical ...    29   4.4  

>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 24/56 (42%), Positives = 36/56 (64%)
 Frame = +3

Query: 135 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 302
           G  +P+A DV K+L + G++ D E    V+  L GK + ++IA G+ KLSS+P GG
Sbjct: 14  GNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSGG 69


>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 34/99 (34%), Positives = 42/99 (42%)
 Frame = +3

Query: 135 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXX 314
           G   P   D++ ILS+VG++AD E  K V++ L GK VE+LIA G   L S  V GG   
Sbjct: 14  GNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVS--VSGGAAP 71

Query: 315 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 431
                                           MGFGLFD
Sbjct: 72  AAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +3

Query: 75  QVEDLKNALRGRVFTWLCWSGKTTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVE 251
           Q+E L   LR R+F    +   +TPA+A   +I  + GI    EK+  +ITE+ N KD+E
Sbjct: 425 QIEFLLQHLR-RIFEG--FDEGSTPASASDHRISRTFGINESEEKVVAMITEIRNQKDLE 481

Query: 252 QLI 260
           + +
Sbjct: 482 EAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +3

Query: 75  QVEDLKNALRGRVFTWLCWSGKTTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVE 251
           Q+E L   LR R+F    +   +TPA+A   +I  + GI    EK+  +ITE+ N KD+E
Sbjct: 425 QIEFLLQHLR-RIFEG--FDEGSTPASASDHRISRTFGINESEEKVVAMITEIRNQKDLE 481

Query: 252 QLI 260
           + +
Sbjct: 482 EAV 484


>AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical
           protein F54A5.1 protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = -3

Query: 304 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPL 131
           P P       SRP+AI  +TS   S +    +  PS S P+ L +F+ +   GV LP+
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLPV 396


>AF016673-5|AAB66123.1|  684|Caenorhabditis elegans Hypothetical
           protein T06D4.4 protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +3

Query: 126 CWSGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQL 257
           CW  K T      E +   VG EA    LKK   E+NG  VE++
Sbjct: 564 CWRKKITGTRFLNEMLADHVGHEASFMALKKWEKEMNGTIVEKI 607


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,060,851
Number of Sequences: 27780
Number of extensions: 234091
Number of successful extensions: 550
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)