Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_N10
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0069 + 27475072-27475136,27475237-27475465,27475532-274756...    36   0.034
05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009     36   0.034
02_05_0995 + 33377933-33378000,33378099-33378327,33378410-33378451     36   0.060
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    30   3.0  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    28   9.1  

>05_07_0069 +
           27475072-27475136,27475237-27475465,27475532-27475630,
           27476172-27476287,27476670-27476757
          Length = 198

 Score = 36.3 bits (80), Expect = 0.034
 Identities = 23/80 (28%), Positives = 36/80 (45%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +R       N + L++ G   +      AGK   YVY+A  ++          + +R 
Sbjct: 19  GYKRSKSNQYENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAKTKS--------NDSTIRC 70

Query: 458 IWGXVTRPXGXAGRCPSXFQ 517
           IWG VTRP G +G   + F+
Sbjct: 71  IWGKVTRPHGNSGVVRAKFR 90


>05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009
          Length = 111

 Score = 36.3 bits (80), Expect = 0.034
 Identities = 23/80 (28%), Positives = 36/80 (45%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +R       N + L++ G   +      AGK   YVY+A  ++          + +R 
Sbjct: 19  GYKRSKSNQYENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAKTKS--------NDSTIRC 70

Query: 458 IWGXVTRPXGXAGRCPSXFQ 517
           IWG VTRP G +G   + F+
Sbjct: 71  IWGKVTRPHGNSGVVRAKFR 90


>02_05_0995 + 33377933-33378000,33378099-33378327,33378410-33378451
          Length = 112

 Score = 35.5 bits (78), Expect = 0.060
 Identities = 24/80 (30%), Positives = 35/80 (43%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +R       N + +++ G   +       GK   YVY+A  +T   G      T  R 
Sbjct: 20  GYKRSKSNQYENTSLVQIEGVNTKEEVAWYCGKRMAYVYKA--KTKSGG------TNYRC 71

Query: 458 IWGXVTRPXGXAGRCPSXFQ 517
           IWG VTRP G +G   + F+
Sbjct: 72  IWGKVTRPHGNSGVVRAKFK 91


>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 154 VXKKKKXQRXNXXXXXKXXKXPKXKQQKXKQXXXKKKGRKXR 279
           V KKKK ++       K  K  K K++K K+   KKK +K +
Sbjct: 66  VMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = +1

Query: 781 PPRXXXXKXXXXPXXXGAXXPXXAPXXGPPXXFPPPGXP 897
           PP          P   GA  P  AP   PP   PPP  P
Sbjct: 30  PPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQP 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,958,664
Number of Sequences: 37544
Number of extensions: 301815
Number of successful extensions: 478
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)