Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_N10
         (924 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC061890-1|AAH61890.1|  110|Homo sapiens ribosomal protein L35a ...    50   9e-06
BC017093-1|AAH17093.1|  110|Homo sapiens RPL35A protein protein.       50   9e-06
BC010949-1|AAH10949.1|  110|Homo sapiens ribosomal protein L35a ...    50   9e-06
BC001037-1|AAH01037.1|  110|Homo sapiens ribosomal protein L35a ...    50   9e-06
AY871273-1|AAX11429.1|  110|Homo sapiens cell growth-inhibiting ...    50   9e-06
X52966-1|CAA37138.1|  110|Homo sapiens protein ( Human mRNA for ...    50   1e-05
AL365223-3|CAI15713.1|   96|Homo sapiens ribosomal protein L35a ...    37   0.090

>BC061890-1|AAH61890.1|  110|Homo sapiens ribosomal protein L35a
           protein.
          Length = 110

 Score = 50.4 bits (115), Expect = 9e-06
 Identities = 30/80 (37%), Positives = 37/80 (46%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +RGL     + A LK+ G   R       GK   YVY+A   T  PG   G   K R 
Sbjct: 13  GYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG---GKPNKTRV 69

Query: 458 IWGXVTRPXGXAGRCPSXFQ 517
           IWG VTR  G +G   + F+
Sbjct: 70  IWGKVTRAHGNSGMVRAKFR 89



 Score = 36.3 bits (80), Expect = 0.16
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +3

Query: 501 VRAXFKSNXPAXPXGHXXRVMLPPSR 578
           VRA F+SN PA   GH  RVML PSR
Sbjct: 84  VRAKFRSNLPAKAIGHRIRVMLYPSR 109


>BC017093-1|AAH17093.1|  110|Homo sapiens RPL35A protein protein.
          Length = 110

 Score = 50.4 bits (115), Expect = 9e-06
 Identities = 30/80 (37%), Positives = 37/80 (46%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +RGL     + A LK+ G   R       GK   YVY+A   T  PG   G   K R 
Sbjct: 13  GYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG---GKPNKTRV 69

Query: 458 IWGXVTRPXGXAGRCPSXFQ 517
           IWG VTR  G +G   + F+
Sbjct: 70  IWGKVTRAHGNSGMVRAKFR 89



 Score = 36.3 bits (80), Expect = 0.16
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +3

Query: 501 VRAXFKSNXPAXPXGHXXRVMLPPSR 578
           VRA F+SN PA   GH  RVML PSR
Sbjct: 84  VRAKFRSNLPAKAIGHRIRVMLYPSR 109


>BC010949-1|AAH10949.1|  110|Homo sapiens ribosomal protein L35a
           protein.
          Length = 110

 Score = 50.4 bits (115), Expect = 9e-06
 Identities = 30/80 (37%), Positives = 37/80 (46%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +RGL     + A LK+ G   R       GK   YVY+A   T  PG   G   K R 
Sbjct: 13  GYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG---GKPNKTRV 69

Query: 458 IWGXVTRPXGXAGRCPSXFQ 517
           IWG VTR  G +G   + F+
Sbjct: 70  IWGKVTRAHGNSGMVRAKFR 89



 Score = 36.3 bits (80), Expect = 0.16
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +3

Query: 501 VRAXFKSNXPAXPXGHXXRVMLPPSR 578
           VRA F+SN PA   GH  RVML PSR
Sbjct: 84  VRAKFRSNLPAKAIGHRIRVMLYPSR 109


>BC001037-1|AAH01037.1|  110|Homo sapiens ribosomal protein L35a
           protein.
          Length = 110

 Score = 50.4 bits (115), Expect = 9e-06
 Identities = 30/80 (37%), Positives = 37/80 (46%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +RGL     + A LK+ G   R       GK   YVY+A   T  PG   G   K R 
Sbjct: 13  GYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG---GKPNKTRV 69

Query: 458 IWGXVTRPXGXAGRCPSXFQ 517
           IWG VTR  G +G   + F+
Sbjct: 70  IWGKVTRAHGNSGMVRAKFR 89



 Score = 36.3 bits (80), Expect = 0.16
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +3

Query: 501 VRAXFKSNXPAXPXGHXXRVMLPPSR 578
           VRA F+SN PA   GH  RVML PSR
Sbjct: 84  VRAKFRSNLPAKAIGHRIRVMLYPSR 109


>AY871273-1|AAX11429.1|  110|Homo sapiens cell growth-inhibiting
           protein 33 protein.
          Length = 110

 Score = 50.4 bits (115), Expect = 9e-06
 Identities = 30/80 (37%), Positives = 37/80 (46%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +RGL     + A LK+ G   R       GK   YVY+A   T  PG   G   K R 
Sbjct: 13  GYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG---GKPNKTRV 69

Query: 458 IWGXVTRPXGXAGRCPSXFQ 517
           IWG VTR  G +G   + F+
Sbjct: 70  IWGKVTRAHGNSGMVRAKFR 89



 Score = 36.3 bits (80), Expect = 0.16
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +3

Query: 501 VRAXFKSNXPAXPXGHXXRVMLPPSR 578
           VRA F+SN PA   GH  RVML PSR
Sbjct: 84  VRAKFRSNLPAKAIGHRIRVMLYPSR 109


>X52966-1|CAA37138.1|  110|Homo sapiens protein ( Human mRNA for
           ribosomal protein L35a. ).
          Length = 110

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 30/80 (37%), Positives = 37/80 (46%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +RGL     + A LK+ G   R       GK   YVY+A   T  PG   G   K R 
Sbjct: 13  GYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG---GKPNKTRV 69

Query: 458 IWGXVTRPXGXAGRCPSXFQ 517
           IWG VTR  G +G   + F+
Sbjct: 70  IWGKVTRAHGNSGMVLAKFR 89



 Score = 33.5 bits (73), Expect = 1.1
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = +3

Query: 501 VRAXFKSNXPAXPXGHXXRVMLPPSR 578
           V A F+SN PA   GH  RVML PSR
Sbjct: 84  VLAKFRSNLPAKAIGHRIRVMLYPSR 109


>AL365223-3|CAI15713.1|   96|Homo sapiens ribosomal protein L35a
           pseudogene 3 protein.
          Length = 96

 Score = 37.1 bits (82), Expect = 0.090
 Identities = 25/79 (31%), Positives = 32/79 (40%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +R L     + A LK+ G   +       GK    VY+A   T  PG       K R 
Sbjct: 12  GYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG---SKPNKSRV 68

Query: 458 IWGXVTRPXGXAGRCPSXF 514
           IWG VTR    +G   + F
Sbjct: 69  IWGKVTRAHRNSGMVAAKF 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,868,948
Number of Sequences: 237096
Number of extensions: 1780919
Number of successful extensions: 3457
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3289
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)