Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_N10
         (924 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...    55   1e-07
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...    55   1e-07
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...    55   1e-07

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 40/79 (50%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +RGL     N A LK+ GA  +       GK  VYVY+A  +   P  P   KT++RA
Sbjct: 58  GYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRA 116

Query: 458 IWGXVTRPXGXAGRCPSXF 514
           +WG VTR  G  G   + F
Sbjct: 117 VWGKVTRIHGNTGAVRARF 135



 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 501 VRAXFKSNXPAXPXGHXXRVMLPPSR 578
           VRA F  N P    GH  R+ML PSR
Sbjct: 131 VRARFNRNLPGHAMGHRIRIMLYPSR 156


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 40/79 (50%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +RGL     N A LK+ GA  +       GK  VYVY+A  +   P  P   KT++RA
Sbjct: 58  GYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRA 116

Query: 458 IWGXVTRPXGXAGRCPSXF 514
           +WG VTR  G  G   + F
Sbjct: 117 VWGKVTRIHGNTGAVRARF 135



 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 501 VRAXFKSNXPAXPXGHXXRVMLPPSR 578
           VRA F  N P    GH  R+ML PSR
Sbjct: 131 VRARFNRNLPGHAMGHRIRIMLYPSR 156


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 40/79 (50%)
 Frame = +2

Query: 278 GXQRGLPXXXGNPAPLKVXGA*DRAXXPXXAGKHSVYVYRAXXRTPXPGXPRGXKTKLRA 457
           G +RGL     N A LK+ GA  +       GK  VYVY+A  +   P  P   KT++RA
Sbjct: 58  GYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRA 116

Query: 458 IWGXVTRPXGXAGRCPSXF 514
           +WG VTR  G  G   + F
Sbjct: 117 VWGKVTRIHGNTGAVRARF 135



 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 501 VRAXFKSNXPAXPXGHXXRVMLPPSR 578
           VRA F  N P    GH  R+ML PSR
Sbjct: 131 VRARFNRNLPGHAMGHRIRIMLYPSR 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,518,957
Number of Sequences: 53049
Number of extensions: 470720
Number of successful extensions: 1155
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)