Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_N09
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 38 0.003
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 33 0.041
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.29
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 30 0.38
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 30 0.50
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 29 1.2
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 27 3.5
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 27 4.7
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 26 6.2
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 26 6.2
SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 26 8.2
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 8.2
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 37.5 bits (83), Expect = 0.003
Identities = 26/95 (27%), Positives = 39/95 (41%)
Frame = +1
Query: 238 KMKVFTQKRNPLTGCTEWDMQDEDYDYHQEIARSAFADMLHDTERNQKYSKALKLAIEKM 417
KM T + T ++ Y + ML+D+ R + Y
Sbjct: 195 KMNELTSQTTDQLSVTPKKADNDSYYFESYAGNDIHFLMLNDSVRTEGYRD---FVYHNK 251
Query: 418 HNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACE 522
H K VLD+G GTG+LS+ AK+GA + A +
Sbjct: 252 HIFAGKT-VLDVGCGTGILSMFCAKAGAKKVYAVD 285
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 33.5 bits (73), Expect = 0.041
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 304 EDYDYHQEIARSAFADMLHDTERNQKYSKALKLAIEKMHNDGKKANVLDIGTGTGLLSIM 483
+DY + +ML D R Y A+ ++ H K VLD+G GTG+LS+
Sbjct: 16 KDYYFDSYSHWGIHEEMLKDDVRTLSYRDAI---MQNPHLFRDKI-VLDVGCGTGILSMF 71
Query: 484 AAKSGA 501
A++GA
Sbjct: 72 CARAGA 77
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.7 bits (66), Expect = 0.29
Identities = 30/101 (29%), Positives = 48/101 (47%)
Frame = -1
Query: 801 HSTT*AYMTAESGTTIASSSNRNLCA*ENVDRAPSPINSVSNTSVTRMLAFCFISPFSPT 622
+STT A T+ + ++ SS+ + A + A S +NS ++ + T + S T
Sbjct: 165 NSTTSATPTSSATSSSLSSTAASNSA-TSSSLASSSLNSTTSATATSSSLSSTAASNSAT 223
Query: 621 VSSVDLFGITVTLSATPLHSNIPETAFSHRLKSLTSNNSVS 499
SS+ + T SAT S+I T S LTS+NS +
Sbjct: 224 SSSLASSSLNSTTSATATSSSISSTVSSS--TPLTSSNSTT 262
Score = 27.5 bits (58), Expect = 2.7
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = -1
Query: 780 MTAESGTTIASSSNRNLCA*ENV---DRAPSPINSVSNTSVTRMLAFCFISPFSPTVSSV 610
+++ + TT S+S+ L + + + +P++SVS+ + T S S +SSV
Sbjct: 292 LSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTAT-----STSSTPLSSV 346
Query: 609 DLFGITVTLSATPLHSNIPETAFSHRLKSLTSNNSVS 499
+ T + S+TPL S TA S LTS NS S
Sbjct: 347 NSTTAT-SASSTPLTSVNSTTATSASSTPLTSVNSTS 382
Score = 27.5 bits (58), Expect = 2.7
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = -1
Query: 780 MTAESGTTIASSSNRNLCA*ENVDR---APSPINSVSNTSVTRMLAFCFISPFSPTVSSV 610
+T+ + TT S+S+ L + + + +P+ S ++T+ T +S +P+ ++
Sbjct: 473 LTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTS------VSSTAPSYNTS 526
Query: 609 DLFGITVTLSATPLHSNIPETAFSHRLKSLTSNNSVS 499
+ T ++S+TPL S TA S LTS NS +
Sbjct: 527 SVLP-TSSVSSTPLSSANSTTATSASSTPLTSVNSTT 562
Score = 27.1 bits (57), Expect = 3.5
Identities = 31/101 (30%), Positives = 48/101 (47%)
Frame = -1
Query: 801 HSTT*AYMTAESGTTIASSSNRNLCA*ENVDRAPSPINSVSNTSVTRMLAFCFISPFSPT 622
++T+ T+ +T SS+N + +P++SV++T+ T S S
Sbjct: 409 YNTSSVLPTSSVSSTPLSSANSTTAT----SASSTPLSSVNSTTAT--------SASSTP 456
Query: 621 VSSVDLFGITVTLSATPLHSNIPETAFSHRLKSLTSNNSVS 499
+SSV+ T + S+TPL S TA S LTS NS S
Sbjct: 457 LSSVNSTTAT-SASSTPLTSVNSTTATSASSTPLTSVNSTS 496
Score = 25.8 bits (54), Expect = 8.2
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Frame = -1
Query: 798 STT*AYMTAESGTTIASSSNRNLCA*ENVDRAPSPINSVSNTSVTRMLAFCFISPFSPTV 619
S+T A +A S + +SS N A S ++S +T +T + + S T
Sbjct: 214 SSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSS--STPLTSSNSTTAATSASATS 271
Query: 618 SSVDLFGITV----TLSATPLHSNIPETAFSHRLKSLTSNNSVST 496
SS ++ T S+TPL S TA S LTS NS +T
Sbjct: 272 SSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTT 316
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 442 VLDIGTGTGLLSIMAAKSGA 501
VL++G GTGL+SI+ AK G+
Sbjct: 174 VLELGAGTGLVSILCAKMGS 193
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +1
Query: 40 DLNCWISCLNPEFGDCTVQKLLRIDEENIQRYACKYMNTIYKVTFFNYLLAS 195
DL C +SC + +G C+ ++ +++ + + + ++ FFN+LL S
Sbjct: 160 DLYCSVSCCDCRYGICSPERFIQVLRRDNEAFRSTQQQDAHE--FFNFLLNS 209
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 427 GKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMA 540
GKK +LDIG G G+LS A+ GA ++ A +A PMA
Sbjct: 78 GKK--ILDIGCGGGILSESMARLGA-SVTAVDA-SPMA 111
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 549 TAFSHRLKSLTSNNSVST*FCCHYGEEPCTCANI 448
++ SHR K LTS++++ FC G+ P +I
Sbjct: 307 SSLSHRRKLLTSHSTLKICFCRSRGDPPIVLESI 340
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 232 GSKMKVFTQKRNPLTGCTEWDMQDEDYDYHQEIARSAF 345
G ++KV++ L C D +ED D ++AR+AF
Sbjct: 37 GGRVKVYSPSTEKLI-CEVADADEEDVDIAVKVARAAF 73
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 52 WISCLNPEFGDCTVQKLLRIDEENIQ 129
W S L P F TV+KL + D +NI+
Sbjct: 717 WASLLGPSFSFATVKKLCK-DTDNIE 741
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 394 LKLAIEKMHNDGKKANVLDIGTGTGLLSIMAA 489
L + K + N L++G GTGL+ I AA
Sbjct: 123 LSANLPKWEDLSNSINALELGAGTGLVGISAA 154
>SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 359
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 136 ACKYMNTIYKVTFFNYLLASSHKRFK 213
A KY+N I + F NY L +S K K
Sbjct: 291 ASKYLNAISDIPFLNYELITSTKLAK 316
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 717 NVDRAPSPINSVSNTSVTRMLAFCFISPFSPTVSSVDLFGITVTLSATPLHSNIP 553
N AP+P TS T L +PFSPT++ SA P+ + P
Sbjct: 373 NPTLAPNPTGPSRVTSGTEDLLSLDATPFSPTLAPQHTSSNATKHSAPPVTKSAP 427
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,357,967
Number of Sequences: 5004
Number of extensions: 69767
Number of successful extensions: 223
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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