Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_N04
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical ... 118 5e-27
AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical ... 31 0.79
Z46381-10|CAE17898.2| 366|Caenorhabditis elegans Hypothetical p... 31 1.4
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 30 2.4
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 30 2.4
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 5.6
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 28 9.7
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 28 9.7
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 28 9.7
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 28 9.7
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 28 9.7
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 28 9.7
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 9.7
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 28 9.7
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 28 9.7
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 9.7
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 28 9.7
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 28 9.7
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 28 9.7
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 28 9.7
>AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical
protein Y71H10A.2 protein.
Length = 536
Score = 118 bits (284), Expect = 5e-27
Identities = 61/173 (35%), Positives = 102/173 (58%), Gaps = 1/173 (0%)
Frame = +1
Query: 259 AVRQFYXXXXXXXXXXXXXXXKQLIEKLLRSCD-VKRIYILMRSKKGKSMPERLQSQFNE 435
+VR Y K ++EKLL + D ++ IY+++R++KGK+ ERL ++
Sbjct: 4 SVRDVYAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHD 63
Query: 436 PVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLAQEVNVIFHVAATTRFEEPLK 615
P+++ +R ++P+ K+ + GD+ +G++ ED M + VNV+ H AAT +F+E L+
Sbjct: 64 PLFNRIRQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLR 123
Query: 616 KATFINVRGTREILELAKCCKDLRSFVHVSTAFSNATKSRINHNLEEKIYESP 774
A +NV GT+ I++L KDL+ VHVSTA++N + EKIY+SP
Sbjct: 124 AAVTMNVIGTKRIIDLCHQIKDLKVLVHVSTAYANCDR----FETTEKIYKSP 172
>AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical
protein K07H8.9 protein.
Length = 254
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +3
Query: 225 GPRGGSASGR---VGCAAVLRGNHSADHWRDGLHRETTHREASK 347
GPRG +A GC ++RGNHS + + LH+ TH + S+
Sbjct: 143 GPRGTTAKQLEKDTGCRIMIRGNHSNKMYGNALHK--THGDGSQ 184
>Z46381-10|CAE17898.2| 366|Caenorhabditis elegans Hypothetical
protein M01F1.9 protein.
Length = 366
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -1
Query: 701 TCTKDLRSLQHLASSKISLVPLTLMNVAFFRGSSNLVVAATWNITFTSCASFILSSSFRP 522
+ T D +LA I + +T+ N++ RG +V W C I ++S
Sbjct: 5 SATLDREVAIYLAGETIRIT-VTVSNLS--RGKQGVVEQLAWGSLQLICERTIGATSSNS 61
Query: 521 TPSSEMSPSTGIT 483
TPSS P+T +T
Sbjct: 62 TPSSRPRPTTSVT 74
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 397 KSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEG 501
+S+P+RL S EP++D +P R V+P++G
Sbjct: 950 RSIPDRLVSPLQEPIWD---EPEPALQRVVLPLDG 981
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 397 KSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEG 501
+S+P+RL S EP++D +P R V+P++G
Sbjct: 962 RSIPDRLVSPLQEPIWD---EPEPALQRVVLPLDG 993
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 247 EALPPLGPSDARPARSPKPKRCP 179
EA PP P+DA PA +P+P P
Sbjct: 36 EAPPPPPPADAAPAPAPEPAPAP 58
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 280 PRRTAAQPTRPEALPPLGPSDARPARSPKP 191
P R QP P PP P A PA +P P
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 280 PRRTAAQPTRPEALPPLGPSDARPARSPKP 191
P R QP P PP P A PA +P P
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 280 PRRTAAQPTRPEALPPLGPSDARPARSPKP 191
P R QP P PP P A PA +P P
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 376 LMRSKKGKSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLA 555
LM + + Q +NE + ++ FAR+ PVEG + + + ED+
Sbjct: 294 LMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVEGQLRVFCMTDDKEDKTLEK 353
Query: 556 QEVNVIFHVAATTRFEEPLK-KATFINVRG 642
QE F + A +R E LK K F+ G
Sbjct: 354 QE---HFKLIAKSRDVEVLKGKHQFLEFSG 380
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 376 LMRSKKGKSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLA 555
LM + + Q +NE + ++ FAR+ PVEG + + + ED+
Sbjct: 404 LMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVEGQLRVFCMTDDKEDKTLEK 463
Query: 556 QEVNVIFHVAATTRFEEPLK-KATFINVRG 642
QE F + A +R E LK K F+ G
Sbjct: 464 QE---HFKLIAKSRDVEVLKGKHQFLEFSG 490
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 376 LMRSKKGKSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLA 555
LM + + Q +NE + ++ FAR+ PVEG + + + ED+
Sbjct: 1308 LMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVEGQLRVFCMTDDKEDKTLEK 1367
Query: 556 QEVNVIFHVAATTRFEEPLK-KATFINVRG 642
QE F + A +R E LK K F+ G
Sbjct: 1368 QE---HFKLIAKSRDVEVLKGKHQFLEFSG 1394
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 376 LMRSKKGKSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLA 555
LM + + Q +NE + ++ FAR+ PVEG + + + ED+
Sbjct: 1308 LMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVEGQLRVFCMTDDKEDKTLEK 1367
Query: 556 QEVNVIFHVAATTRFEEPLK-KATFINVRG 642
QE F + A +R E LK K F+ G
Sbjct: 1368 QE---HFKLIAKSRDVEVLKGKHQFLEFSG 1394
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 376 LMRSKKGKSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLA 555
LM + + Q +NE + ++ FAR+ PVEG + + + ED+
Sbjct: 1308 LMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVEGQLRVFCMTDDKEDKTLEK 1367
Query: 556 QEVNVIFHVAATTRFEEPLK-KATFINVRG 642
QE F + A +R E LK K F+ G
Sbjct: 1368 QE---HFKLIAKSRDVEVLKGKHQFLEFSG 1394
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 376 LMRSKKGKSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLA 555
LM + + Q +NE + ++ FAR+ PVEG + + + ED+
Sbjct: 1314 LMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVEGQLRVFCMTDDKEDKTLEK 1373
Query: 556 QEVNVIFHVAATTRFEEPLK-KATFINVRG 642
QE F + A +R E LK K F+ G
Sbjct: 1374 QE---HFKLIAKSRDVEVLKGKHQFLEFSG 1400
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 376 LMRSKKGKSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLA 555
LM + + Q +NE + ++ FAR+ PVEG + + + ED+
Sbjct: 1314 LMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVEGQLRVFCMTDDKEDKTLEK 1373
Query: 556 QEVNVIFHVAATTRFEEPLK-KATFINVRG 642
QE F + A +R E LK K F+ G
Sbjct: 1374 QE---HFKLIAKSRDVEVLKGKHQFLEFSG 1400
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 376 LMRSKKGKSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLA 555
LM + + Q +NE + ++ FAR+ PVEG + + + ED+
Sbjct: 1308 LMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVEGQLRVFCMTDDKEDKTLEK 1367
Query: 556 QEVNVIFHVAATTRFEEPLK-KATFINVRG 642
QE F + A +R E LK K F+ G
Sbjct: 1368 QE---HFKLIAKSRDVEVLKGKHQFLEFSG 1394
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 376 LMRSKKGKSMPERLQSQFNEPVYDNLRSQQPDFARKVIPVEGDISELGVGLNDEDRMKLA 555
LM + + Q +NE + ++ FAR+ PVEG + + + ED+
Sbjct: 1314 LMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVEGQLRVFCMTDDKEDKTLEK 1373
Query: 556 QEVNVIFHVAATTRFEEPLK-KATFINVRG 642
QE F + A +R E LK K F+ G
Sbjct: 1374 QE---HFKLIAKSRDVEVLKGKHQFLEFSG 1400
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 280 PRRTAAQPTRPEALPPLGPSDARPARSPKP 191
P R QP P PP P A PA +P P
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 280 PRRTAAQPTRPEALPPLGPSDARPARSPKP 191
P R QP P PP P A PA +P P
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 333 YELFPDEARPSSDQRCGSRVELPHSRLAPKR 241
+ L P RPSS QR + P +R P+R
Sbjct: 414 HHLIPSSTRPSSHQRPSLQPTAPRTRSCPRR 444
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 171 FQNGQRFGFGDRAGLASEGPRGGSASGRVG 260
F+ G R GFG G G RGG GR G
Sbjct: 185 FRGGDRGGFGGGRGGFRGGDRGGFRGGRGG 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,151,373
Number of Sequences: 27780
Number of extensions: 364749
Number of successful extensions: 1180
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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