Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_N03
         (927 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   5.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   5.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   6.9  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 536 IEEKRQRLEEAEKKRXAMLQAMKDASKTGPNFXIQKKSENFG 661
           I  + +R++  EK    +L  + +AS   PN  +     NFG
Sbjct: 327 INTRGERIQLTEKNGIDVLGNIMEASILSPNQNVYGDLHNFG 368



 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 755 PIEGSLRSTNSDRR 796
           P EG +R  N DRR
Sbjct: 217 PFEGDIRIVNKDRR 230


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 734 GQERFSSPLPXAPW 693
           G  RF  PLP  PW
Sbjct: 73  GPLRFRKPLPIEPW 86


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 734 GQERFSSPLPXAPW 693
           G  RF  PLP  PW
Sbjct: 73  GPLRFRKPLPIEPW 86


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 382 AVCAIR*CIPSTVHP 338
           A C I  C P TVHP
Sbjct: 357 AFCNIVSCSPQTVHP 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,695
Number of Sequences: 438
Number of extensions: 2602
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)