Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M24
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.       32   0.92 
AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2...    32   0.92 
AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA...    32   0.92 

>AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.
          Length = 924

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 21/78 (26%), Positives = 25/78 (32%)
 Frame = +3

Query: 600 SXPXXPXPPVXRXGXXXSLPPXGVXRFPXKXGDTPXKXFXTXGPPKRPXNLKXAXLXGFS 779
           S P  P PP          PP    R       TP       GPP  P   + +   G +
Sbjct: 12  SGPPGPPPP-----RPPKTPPGASPRGTPTADSTPGDVTPARGPPPPPATKRVSIGVGST 66

Query: 780 QKXPPPXXTXKXXPPFKG 833
           +  PPP       PP  G
Sbjct: 67  RSAPPPATDPTGPPPTAG 84


>AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2
           protein.
          Length = 924

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 21/78 (26%), Positives = 25/78 (32%)
 Frame = +3

Query: 600 SXPXXPXPPVXRXGXXXSLPPXGVXRFPXKXGDTPXKXFXTXGPPKRPXNLKXAXLXGFS 779
           S P  P PP          PP    R       TP       GPP  P   + +   G +
Sbjct: 12  SGPPGPPPP-----RPPKTPPGASPRGTPTADSTPGDVTPARGPPPPPATKRVSIGVGST 66

Query: 780 QKXPPPXXTXKXXPPFKG 833
           +  PPP       PP  G
Sbjct: 67  RSAPPPATDPTGPPPTAG 84


>AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA
           protein.
          Length = 924

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 21/78 (26%), Positives = 25/78 (32%)
 Frame = +3

Query: 600 SXPXXPXPPVXRXGXXXSLPPXGVXRFPXKXGDTPXKXFXTXGPPKRPXNLKXAXLXGFS 779
           S P  P PP          PP    R       TP       GPP  P   + +   G +
Sbjct: 12  SGPPGPPPP-----RPPKTPPGASPRGTPTADSTPGDVTPARGPPPPPATKRVSIGVGST 66

Query: 780 QKXPPPXXTXKXXPPFKG 833
           +  PPP       PP  G
Sbjct: 67  RSAPPPATDPTGPPPTAG 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,189,818
Number of Sequences: 53049
Number of extensions: 259661
Number of successful extensions: 622
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)