Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M19
         (1014 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863...    26   0.49 
01_01_0046 - 331758-332627                                             30   2.6  
08_01_0193 + 1599970-1600503,1601488-1601919,1602010-1602147,160...    29   4.5  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   5.9  
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909     29   7.8  

>01_03_0117 +
           12684729-12685886,12685978-12686145,12686292-12686336,
           12686438-12687280
          Length = 737

 Score = 25.8 bits (54), Expect(2) = 0.49
 Identities = 14/53 (26%), Positives = 20/53 (37%)
 Frame = +1

Query: 406 PHPXXTDLHRAXCHAHXXXGPSXPRXDRPTXSQXNCLRXTPXTXPPRXSPGKS 564
           P P  +   +A  H+H    PS P  +RP               PP+ SP  +
Sbjct: 132 PSPSLSPPAKAPSHSHAKT-PSMPPAERPALPPTKAPAAISPATPPQLSPANA 183



 Score = 25.4 bits (53), Expect(2) = 0.49
 Identities = 14/57 (24%), Positives = 16/57 (28%)
 Frame = +1

Query: 682 RXPLXPXXXXSFPXXSPXXXXXLXXFXXXXXXXXPPPXPXXPXLPPXGSXXPPSAXP 852
           + P  P      P  SP                  PP    P +PP     PPS  P
Sbjct: 191 KPPSLPPAEPPVPSPSPEHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAP 247


>01_01_0046 - 331758-332627
          Length = 289

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +1

Query: 784 PPPXPXXPXLPPXGSXXPPSAXPXXXXPH 870
           PPP P  P  PP  S   P + P    PH
Sbjct: 21  PPPPPPPPPPPPSSSRYRPPSPPSSRHPH 49


>08_01_0193 +
           1599970-1600503,1601488-1601919,1602010-1602147,
           1602532-1602600
          Length = 390

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 784 PPPXPXXPXLPPXGSXXP 837
           PPP P  P LPP GS  P
Sbjct: 20  PPPPPPPPPLPPRGSPAP 37


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +1

Query: 784 PPPXPXXPXLPPXGSXXPPSAXPXXXXP 867
           PPP P  P  PP  +  PP   P    P
Sbjct: 106 PPPPPPPPPSPPPSAPPPPPPPPTQPPP 133


>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
          Length = 627

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +1

Query: 784 PPPXPXXPXLPPXGSXXPPSAXPXXXXP 867
           PPP P     PP  S  PP+A P    P
Sbjct: 79  PPPHPAYMHPPPFDSAPPPAAAPPPSDP 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,122,423
Number of Sequences: 37544
Number of extensions: 212352
Number of successful extensions: 1232
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2987258700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)