Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M18
         (1003 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    52   2e-08
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    21   4.9  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 52.4 bits (120), Expect = 2e-08
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +3

Query: 207 YGQGSRSCRSCSNRHGLXRKYGLNICR 287
           YGQGSR  R+CSN HG+ RKYGLNICR
Sbjct: 14  YGQGSRFWRACSNNHGMIRKYGLNICR 40



 Score = 26.6 bits (56), Expect = 1.2
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 167 MGHANXWYSHP 199
           MG AN WYSHP
Sbjct: 1   MGFANLWYSHP 11


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.4 bits (43), Expect(2) = 4.9
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +3

Query: 669 SXGHFVXXFXHPPXXPPPP 725
           S   F      PP  PPPP
Sbjct: 772 SRSAFADGIGSPPPPPPPP 790



 Score = 21.0 bits (42), Expect(2) = 4.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 702 PPXXPPPPNXXEXTG 746
           PP  PPPP+     G
Sbjct: 784 PPPPPPPPSSLSPGG 798


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,238
Number of Sequences: 2352
Number of extensions: 8824
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110174532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)