Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_M17
(920 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 38 0.013
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.031
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.031
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.031
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 36 0.031
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.29
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.29
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.29
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.29
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.29
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.38
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.50
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.50
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 32 0.50
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.50
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.66
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.66
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 0.88
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 0.88
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 31 0.88
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 0.88
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.2
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.2
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.5
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.5
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.0
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 2.0
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 2.0
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 2.0
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 2.7
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 2.7
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 6.2
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 6.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.2
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 6.2
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 6.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 6.2
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.2
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 28 8.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 8.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 8.2
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 8.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 37.5 bits (83), Expect = 0.013
Identities = 25/68 (36%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +1
Query: 718 GGXPPG-GILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPP 894
G PPG I K F P P G PPG PP GG P + PP
Sbjct: 50 GILPPGQSIPKPSFFIPPPVPNG-FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Query: 895 PXXGPPPP 918
P G PPP
Sbjct: 109 PMFGAPPP 116
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.031
Identities = 24/67 (35%), Positives = 25/67 (37%)
Frame = +1
Query: 718 GGXPPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPPP 897
G PP G+ G PP P G PP PP P G P P PPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPG---GLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Query: 898 XXGPPPP 918
PPPP
Sbjct: 766 GGCPPPP 772
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/66 (36%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +1
Query: 727 PPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPR--VXXPPPX 900
PPGG+ G PP P G PP PP P G P P PPP
Sbjct: 731 PPGGLPPITGGPPPPPPPG---GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP- 786
Query: 901 XGPPPP 918
PPPP
Sbjct: 787 --PPPP 790
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXG-PXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXKX 615
PPPP G P PP G P GG PP GG P P F
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP---PPPPGGFKGG 783
Query: 616 PXXGPNP 636
P P P
Sbjct: 784 PPPPPPP 790
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXP 591
PPPP P P PP P GG PP GG P GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG--LPPISGGPP 759
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 590 GXPPXXGXXXXPPXGGXKXXPPPXXXGPXXFXGG 489
G PP G PP PPP P F GG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.031
Identities = 24/67 (35%), Positives = 25/67 (37%)
Frame = +1
Query: 718 GGXPPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPPP 897
G PP G+ G PP P G PP PP P G P P PPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPG---GLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Query: 898 XXGPPPP 918
PPPP
Sbjct: 766 GGCPPPP 772
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/66 (36%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +1
Query: 727 PPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPR--VXXPPPX 900
PPGG+ G PP P G PP PP P G P P PPP
Sbjct: 731 PPGGLPPITGGPPPPPPPG---GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP- 786
Query: 901 XGPPPP 918
PPPP
Sbjct: 787 --PPPP 790
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXG-PXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXKX 615
PPPP G P PP G P GG PP GG P P F
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP---PPPPGGFKGG 783
Query: 616 PXXGPNP 636
P P P
Sbjct: 784 PPPPPPP 790
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXP 591
PPPP P P PP P GG PP GG P GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG--LPPISGGPP 759
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 590 GXPPXXGXXXXPPXGGXKXXPPPXXXGPXXFXGG 489
G PP G PP PPP P F GG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.031
Identities = 24/67 (35%), Positives = 25/67 (37%)
Frame = +1
Query: 718 GGXPPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPPP 897
G PP G+ G PP P G PP PP P G P P PPP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPG---GLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Query: 898 XXGPPPP 918
PPPP
Sbjct: 349 GGCPPPP 355
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/66 (36%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +1
Query: 727 PPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPR--VXXPPPX 900
PPGG+ G PP P G PP PP P G P P PPP
Sbjct: 314 PPGGLPPITGGPPPPPPPG---GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP- 369
Query: 901 XGPPPP 918
PPPP
Sbjct: 370 --PPPP 373
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXG-PXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXKX 615
PPPP G P PP G P GG PP GG P P F
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP---PPPPGGFKGG 366
Query: 616 PXXGPNP 636
P P P
Sbjct: 367 PPPPPPP 373
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXP 591
PPPP P P PP P GG PP GG P GG P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG--LPPISGGPP 342
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 590 GXPPXXGXXXXPPXGGXKXXPPPXXXGPXXFXGG 489
G PP G PP PPP P F GG
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 36.3 bits (80), Expect = 0.031
Identities = 27/69 (39%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 718 GGXPP--GGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXP 891
GG PP GG+ G PP PRG G + PP G P L P P
Sbjct: 1557 GGLPPPHGGMNGWRGGPPP--PRG-------GSHCQGPPPLM---GGPPPRLGMPPPGPP 1604
Query: 892 PPXXGPPPP 918
PP GPPPP
Sbjct: 1605 PPNGGPPPP 1613
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Frame = -1
Query: 914 GGGPXXG------GGXXTRGXXXKGXXXPPKGKKGGXXXXXXP-GGVXXXGPRGXFXGGN 756
GGGP G RG G P G G P GG GP G
Sbjct: 1534 GGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPP 1593
Query: 755 PXVFKXPPGGXPP 717
P + PPG PP
Sbjct: 1594 PRLGMPPPGPPPP 1606
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 584 PPXXGXXXXPPXGGXKXXPPPXXXGPXXFXGGXGXGXQKXXPXXXGGGG 438
PP PP GG PPP P GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Frame = +2
Query: 440 PPPPGXXGXXF----GPXXXXPPXXXXAPGXXGGGGXXXP 547
P PPG GP PP PG GGGG P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 584 PPXXGXXXXPPXGGXKXXPPPXXXGPXXFXGGXGXGXQKXXPXXXGGGG 438
PP PP GG PPP P GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Frame = +2
Query: 440 PPPPGXXGXXF----GPXXXXPPXXXXAPGXXGGGGXXXP 547
P PPG GP PP PG GGGG P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.29
Identities = 28/120 (23%), Positives = 31/120 (25%), Gaps = 2/120 (1%)
Frame = +1
Query: 478 PXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXF--XKXPXXGPNPKXXXX 651
P P PP K P G G PP G P G P P G P
Sbjct: 237 PPPPPPPK-GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 652 XXXXXXXXXXXXXXXXXXXXXXGGXPPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPP 831
GG PP + PP + + P P G PP
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 355
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXKXP 618
PPPP P PP P G PP G P G P + P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 619 XXGP 630
P
Sbjct: 300 PPPP 303
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/70 (37%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = +1
Query: 721 GXPPGGILKTXGFPPXKXPRG----PXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXX 888
G PP L G PP G P +PP PP P GG P PR
Sbjct: 245 GSPP---LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP-PPAGGSPPP----PRAGS 296
Query: 889 PPPXXGPPPP 918
PPP PPPP
Sbjct: 297 PPP---PPPP 303
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Frame = +1
Query: 721 GXPPGGILKTXGFPPXKXPRGPXXX--TPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPP 894
G PP + PP P P PP PP P G L P+ P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Query: 895 PXXG---PPPP 918
P G PPPP
Sbjct: 322 PPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.29
Identities = 28/120 (23%), Positives = 31/120 (25%), Gaps = 2/120 (1%)
Frame = +1
Query: 478 PXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXF--XKXPXXGPNPKXXXX 651
P P PP K P G G PP G P G P P G P
Sbjct: 258 PPPPPPPK-GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 652 XXXXXXXXXXXXXXXXXXXXXXGGXPPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPP 831
GG PP + PP + + P P G PP
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 376
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXKXP 618
PPPP P PP P G PP G P G P + P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 619 XXGP 630
P
Sbjct: 321 PPPP 324
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/70 (37%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = +1
Query: 721 GXPPGGILKTXGFPPXKXPRG----PXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXX 888
G PP L G PP G P +PP PP P GG P PR
Sbjct: 266 GSPP---LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP-PPAGGSPPP----PRAGS 317
Query: 889 PPPXXGPPPP 918
PPP PPPP
Sbjct: 318 PPP---PPPP 324
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Frame = +1
Query: 721 GXPPGGILKTXGFPPXKXPRGPXXX--TPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPP 894
G PP + PP P P PP PP P G L P+ P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Query: 895 PXXG---PPPP 918
P G PPPP
Sbjct: 343 PPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.29
Identities = 28/120 (23%), Positives = 31/120 (25%), Gaps = 2/120 (1%)
Frame = +1
Query: 478 PXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXF--XKXPXXGPNPKXXXX 651
P P PP K P G G PP G P G P P G P
Sbjct: 243 PPPPPPPK-GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 652 XXXXXXXXXXXXXXXXXXXXXXGGXPPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPP 831
GG PP + PP + + P P G PP
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 361
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXKXP 618
PPPP P PP P G PP G P G P + P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 619 XXGP 630
P
Sbjct: 306 PPPP 309
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/70 (37%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = +1
Query: 721 GXPPGGILKTXGFPPXKXPRG----PXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXX 888
G PP L G PP G P +PP PP P GG P PR
Sbjct: 251 GSPP---LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP-PPAGGSPPP----PRAGS 302
Query: 889 PPPXXGPPPP 918
PPP PPPP
Sbjct: 303 PPP---PPPP 309
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Frame = +1
Query: 721 GXPPGGILKTXGFPPXKXPRGPXXX--TPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPP 894
G PP + PP P P PP PP P G L P+ P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Query: 895 PXXG---PPPP 918
P G PPPP
Sbjct: 328 PPAGTGSPPPP 338
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/63 (36%), Positives = 24/63 (38%)
Frame = -1
Query: 917 GGGGPXXGGGXXTRGXXXKGXXXPPKGKKGGXXXXXXPGGVXXXGPRGXFXGGNPXVFKX 738
G GGP G G G PP+G GG PGG GP G P V
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPPQGGPGG-FGPPPPGGPGAYGPP---PTGFPPVGAP 457
Query: 737 PPG 729
PPG
Sbjct: 458 PPG 460
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/70 (34%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +1
Query: 718 GGXPPGGILKTX-GFPPXKXPRG-PXXXT---PPGXXXKXXPPFXPFGGXXXPXLXXPRV 882
G PP G + G PP P+G P + PP P FGG P P
Sbjct: 319 GAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSP-QSFGGPPPPVSSAPGN 377
Query: 883 XXPPPXXGPP 912
PPP GPP
Sbjct: 378 FAPPPQSGPP 387
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +2
Query: 404 GGXGGXFXXXKXPPPPGXXGXXFGPXXXXPPXXXXAPGXXGGGG 535
GG GG PPPPG G P PP PG G G
Sbjct: 428 GGPGGF-----GPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPG 466
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = +1
Query: 718 GGXPPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPPP 897
G PP + G PP + PP + PP FG P P
Sbjct: 307 GYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAP---SPQS 363
Query: 898 XXGPPPP 918
GPPPP
Sbjct: 364 FGGPPPP 370
Score = 29.5 bits (63), Expect = 3.5
Identities = 32/139 (23%), Positives = 35/139 (25%), Gaps = 3/139 (2%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXKXP 618
PPP F P PP GP G PP P G P
Sbjct: 321 PPPQGAPQQGFGAPPQGPPQ--GGPPQ--GSFGAPPPQQFHAPSPQSFGGPPPPVSSAPG 376
Query: 619 XXGPNPKXXXXXXXXXXXXXXXXXXXXXXXXXXGGXPPGGILKTXGFPPXKXPRGPXXXT 798
P P+ G PPGG + P + G
Sbjct: 377 NFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP 436
Query: 799 PPGXXXKXXPP---FXPFG 846
PPG PP F P G
Sbjct: 437 PPGGPGAYGPPPTGFPPVG 455
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Frame = +1
Query: 727 PPGGILKTXG-FPPXKXPRGPXXXTPP-----GXXXKXXPPFXPFGGXXXPXLXXPRVXX 888
PPG F + P GP PP G PP GG P P
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYG 445
Query: 889 PPPXXGPP 912
PPP PP
Sbjct: 446 PPPTGFPP 453
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 546 GXXXPPPPXXPGAXXFXGGXXXXGPKXXPXXPGGGGXF 433
G PPPP PGA G P PGG G +
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +1
Query: 439 PPPPXXXGXXFWXP-XPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXP 591
PPPP G W P P PP + GP G PP P GG P
Sbjct: 287 PPPPPSSG--MWPPPPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMP 334
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 555 PXXGXXXPPPPXXPGAXXFXGGXXXXGPKXXPXXPGGGGXFXXXKXPPXPP 403
P G PPPP PG G P P G G PP PP
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG--MGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +1
Query: 439 PPPPXXXGXXFWXP-XPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXP 591
PPPP G W P P PP + GP G PP P GG P
Sbjct: 297 PPPPPSSG--MWPPPPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMP 344
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 555 PXXGXXXPPPPXXPGAXXFXGGXXXXGPKXXPXXPGGGGXFXXXKXPPXPP 403
P G PPPP PG G P P G G PP PP
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG--MGGMPPPPPP 349
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 590 GXPPXXGXXXXPPXGGXKXXPPPXXXGPXXFXGGXGXG 477
G PP G PP G PPP GP G G G
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 590 GXPPXXGXXXXPPXGGXKXXPPPXXXGPXXFXGGXGXG 477
G PP G PP G PPP GP G G G
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 546 GXXXPP-PPXXPGAXXFXGGXXXXGPKXXPXXPGGGGXFXXXKXPPXPP 403
G PP PP PGA G GPK P P G PP PP
Sbjct: 224 GDSGPPGPPGPPGAPGNDGPPGPPGPKGAP-GPDGPPGVDGQSGPPGPP 271
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +1
Query: 760 PPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPR-VXXPPPXXGPPPP 918
PP + PR P +PP PP P PR PP PPPP
Sbjct: 142 PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 760 PPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPPPXXGPPPP 918
PP + P P P K PP P P + P PPP PPPP
Sbjct: 476 PPSRIPN-PSPSPQPAEVSKSPPPPPPL-----PPIATPSSVPPPPPPPPPPP 522
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Frame = +3
Query: 390 FXXPXGGXGGFXXXKKXPPPX-GXGXXFLXPXPXPPXKXPG---PXXXXGGXGFXXPXXG 557
F P GG GG PPP G G L P P + P P GG G P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 546 GXXXPP-PPXXPGAXXFXGGXXXXGPKXXPXXPGGGGXFXXXKXPPXPP 403
G PP PP PGA G GPK P P G PP PP
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPPGPPGPKGAP-GPDGPPGADGQSGPPGPP 266
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 917 GGGGPXXGGGXXTRGXXXKGXXXPPKGKKGGXXXXXXPGGVXXXGPRG 774
G GGP GG G + P+G+ G PG GPRG
Sbjct: 179 GPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQPGRPGPPGPRG 226
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 546 GXXXPP-PPXXPGAXXFXGGXXXXGPKXXPXXPGGGGXFXXXKXPPXPP 403
G PP PP PGA G GPK P P G PP PP
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPPGPPGPKGAP-GPDGPPGADGQSGPPGPP 266
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 760 PPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPPPXXGPPPP 918
PP P P PP P P P P PPP PPPP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +1
Query: 727 PPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPF--XPFGGXXXPXLXXPRVXXPPPX 900
PP G G PP P GP PP + PP+ P+ G P PPP
Sbjct: 683 PPQGQQYYGGPPPPGQPYGPPGGYPP---QQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQ 739
Query: 901 XGPP 912
G P
Sbjct: 740 PGHP 743
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +1
Query: 727 PPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPF--XPFGGXXXPXLXXPRVXXPPPX 900
PP G G PP P GP PP + PP+ P+ G P PPP
Sbjct: 683 PPQGQQYYGGPPPPGQPYGPPGGYPP---QQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQ 739
Query: 901 XGPP 912
G P
Sbjct: 740 PGHP 743
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 404 GGXGGXFXXXKXPPPPGXXGXXFGPXXXXPPXXXXAPGXXGGGG 535
GG GG P PPG G P P PG G GG
Sbjct: 94 GGGGGQCSTCCRPGPPGAGGTPGKPGRPGAPGAWGMPGNPGKGG 137
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.5
Identities = 41/178 (23%), Positives = 43/178 (24%), Gaps = 5/178 (2%)
Frame = +3
Query: 399 PXGGXGGFXXXKKXPPPXGXGXXFLXPXPXPPXKXPGPXXXXGGXGFXXPXXGXXXXPXX 578
P GG G + PP G F P PGP G P
Sbjct: 192 PSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP 251
Query: 579 XGXXPXKXFXXXXPKXPQPQKXPXLGXFXXXXXXXXXXXXXXXXXXXGP---XPXGXFKN 749
P F P P P G F P P G F
Sbjct: 252 PSGGPPGPF---NPSGAPPSGGPP-GPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 307
Query: 750 PGVSPRKXP--PWXPXXYPPGXXTXXXXPFFXLRGXXGPFXXXXPXGVXPPXXXPPPP 917
G P P P+ P PP GP P G PP PP P
Sbjct: 308 SGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA-PPSGGPPGP 364
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = +1
Query: 721 GXPPGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXP-RVXXPPP 897
G PPG + G PP P GP + PF P G P PP
Sbjct: 179 GGPPGPFGPS-GAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPP 237
Query: 898 XXGPPPP 918
GPP P
Sbjct: 238 SGGPPGP 244
Score = 29.5 bits (63), Expect = 3.5
Identities = 41/178 (23%), Positives = 42/178 (23%), Gaps = 5/178 (2%)
Frame = +3
Query: 399 PXGGXGGFXXXKKXPPPXGXGXXFLXPXPXPPXKXPGPXXXXGGXGFXXPXXGXXXXPXX 578
P GG G PP G F P PGP G P
Sbjct: 327 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAP 386
Query: 579 XGXXPXKXFXXXXPKXPQPQKXPXLGXFXXXXXXXXXXXXXXXXXXXGP---XPXGXFKN 749
P F P P P G F P P G F
Sbjct: 387 PSGGPPGPF---DPSGAPPSGGPP-GPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 442
Query: 750 PGVSPRKXP--PWXPXXYPPGXXTXXXXPFFXLRGXXGPFXXXXPXGVXPPXXXPPPP 917
G P P P+ P PP GP P G PP PP P
Sbjct: 443 SGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA-PPSGGPPGP 499
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 404 GGXGGXFXXXKXPPPPGXXGXXFGPXXXXPPXXXXAPGXXGGG 532
GG GG P PPG G P P APG G G
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKG 134
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 404 GGXGGXFXXXKXPPPPGXXGXXFGPXXXXPPXXXXAPGXXGGG 532
GG GG P PPG G P P APG G G
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKG 134
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 404 GGXGGXFXXXKXPPPPGXXGXXFGPXXXXPPXXXXAPGXXGGG 532
GG GG P PPG G P P APG G G
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKG 134
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 404 GGXGGXFXXXKXPPPPGXXGXXFGPXXXXPPXXXXAPGXXGGG 532
GG GG P PPG G P P APG G G
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKG 134
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 528 PPXXPGAXXFXGGXXXXGPKXXPXXPGGGGXFXXXKXPPXPP 403
PP PGA G GPK P P G PP PP
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSP-GPDGPAGVDGQAGPPGPP 273
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 528 PPXXPGAXXFXGGXXXXGPKXXPXXPGGGGXFXXXKXPPXPP 403
PP PGA G GPK P P G PP PP
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSP-GPDGPAGVDGQAGPPGPP 273
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 914 GGGPXXGGGXXTRGXXXKGXXXPPKGKKGGXXXXXXPGGVXXXGPRGXFXG-GNP 753
GGG G G RG G +G +GG GG G RG F G G+P
Sbjct: 31 GGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGG-RGGGDRGGFGGRGSP 84
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 584 PPXXGXXXXPPXGGXKXXPPPXXXGPXXFXGGXG 483
PP PP GG PPP P GG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGG 806
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Frame = +2
Query: 440 PPPPGXXGXXF----GPXXXXPPXXXXAPGXXGGGGXXXP 547
P PPG GP PP PG GGGG P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +2
Query: 407 GXGGXFXXXKXPPPPGXXGXXFGPXXXXPPXXXXA-PGXXGGGGXXXP 547
G GG PPPP G G P + P GGGG P
Sbjct: 22 GGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPP 69
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Frame = +1
Query: 760 PPXKXPRG--PXXXTPPGXXXKXXPPFX-PFGGXXXPXLXXPRVXXPPPXXGPPPP 918
PP P+ P PP + P P+ P P PPP PPPP
Sbjct: 98 PPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 405 GGXGGFXXXKKXPPPXGXGXXFLXPXPXPP 494
G GG PPP G G F+ P P PP
Sbjct: 652 GSGGGSSMPMPVPPPGGLG-GFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 405 GGXGGFXXXKKXPPPXGXGXXFLXPXPXPP 494
G GG PPP G G F+ P P PP
Sbjct: 652 GSGGGSSMPMPVPPPGGLG-GFMPPPPPPP 680
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 584 PPXXGXXXXPPXGGXKXXPPPXXXGPXXFXGGXG 483
PP PP GG PPP P GG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGG 806
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Frame = +2
Query: 440 PPPPGXXGXXF----GPXXXXPPXXXXAPGXXGGGGXXXP 547
P PPG GP PP PG GGGG P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -1
Query: 917 GGGGPXXGGGXXTRGXXXKGXXXPPKGKKGGXXXXXXPGGVXXXGPRG 774
G G GG +RG P G GG GG GP+G
Sbjct: 188 GSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQG 235
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = -2
Query: 529 PPXXXXGPGXXXGGXGXGXKXXXPXPXGGGXFXXXKXPPXPPXGXXKKKK 380
PP GPG GG G G G G F PP PP G +++
Sbjct: 181 PPSNDFGPGGGGGGMGGGGGSGGSG-GGSGRF----PPPPPPYGGGGRRR 225
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = -1
Query: 917 GGGGPXXGGGXXTRGXXXKGXXXPP--KGKKGGXXXXXXPGGVXXXGPRGXFXGGNPXVF 744
GGGG GGG + G G PP G G PG + + F
Sbjct: 109 GGGGGGGGGGCCSCGIGAAGPAGPPGADGNPGTDGAAGNPGQAGADASQDA-PSASDFCF 167
Query: 743 KXPPGGXPP 717
PPG P
Sbjct: 168 DCPPGPAGP 176
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 390 FXXPXGGXGGFXXXKKXPPPX-GXGXXFLXPXPXPPXKXPGPXXXXGGXGFXXP 548
F P GG GG PPP G G L P P + P G G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGP 70
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -1
Query: 917 GGGGPXXGGGXXTRGXXXKGXXXPPKGKKGGXXXXXXPGGVXXXGPRG 774
G G GG +RG P+G GG GG GP G
Sbjct: 185 GHPGAPGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGGAGAPGPAG 232
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -1
Query: 917 GGGGPXXGGGXXTRGXXXKGXXXPPKGKKGGXXXXXXPGGVXXXGPRG 774
G G GG +RG P+G GG GG GP G
Sbjct: 185 GHPGAPGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGGAGAPGPAG 232
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 390 FXXPXGGXGGFXXXKKXPPPX-GXGXXFLXPXPXPPXKXPGPXXXXGGXGFXXP 548
F P GG GG PPP G G L P P + P G G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGP 70
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 534 PPPPXXPGAXXFXGGXXXXGPKXXPXXPGGGGXFXXXKXPPXPP 403
P PP PG GG G P PG G PP PP
Sbjct: 210 PSPPGEPGQPGEPGGPGEPGADGRPGHPGRAG-------PPGPP 246
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -1
Query: 917 GGGGPXXGGGXXTRGXXXKGXXXPPKGKKGGXXXXXXPGGVXXXGPRGXFXGG 759
GGGG G G G +G G +GG GG G RG GG
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGG-GGGGGRGGGGGG 127
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/63 (31%), Positives = 23/63 (36%)
Frame = +1
Query: 730 PGGILKTXGFPPXKXPRGPXXXTPPGXXXKXXPPFXPFGGXXXPXLXXPRVXXPPPXXGP 909
PG + PP RGP PP + PP+ P P PPP P
Sbjct: 32 PGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPW-----RRPPWHRRPPWGLPPP---P 83
Query: 910 PPP 918
PPP
Sbjct: 84 PPP 86
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -1
Query: 917 GGGGPXXGGGXXTRGXXXKG-XXXPPKGKKGGXXXXXXPGGVXXXGPRGXFXGG 759
G GG GGG G G PP GG GG G RG GG
Sbjct: 124 GWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGG 177
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 546 GXXXPPPPXXPGAXXFXGGXXXXGPKXXPXXPGGGG 439
G PP P P GG GP P PG G
Sbjct: 252 GPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDG 287
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 439 PPPPXXXGXXFWXPXPXPPXKXXGPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXF 606
PPPP P P PP P GG PP GG KK +
Sbjct: 563 PPPPPLPQNLSGAPPPPPPP----PPMLGGPPPPPPPPGGLMGPASNDAKTIKKIY 614
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.158 0.581
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,310,946
Number of Sequences: 27780
Number of extensions: 303529
Number of successful extensions: 2308
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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