Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M15
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0852 + 6652209-6652576,6653666-6654072,6654207-6654229           31   1.6  
11_01_0750 - 6315126-6315896,6316371-6316784                           29   3.6  
12_01_0228 - 1726856-1727049,1727280-1727355,1727454-1727585,172...    28   8.4  
11_01_0231 - 1791754-1791947,1792178-1792253,1792352-1792483,179...    28   8.4  
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423...    28   8.4  

>01_01_0852 + 6652209-6652576,6653666-6654072,6654207-6654229
          Length = 265

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/56 (30%), Positives = 32/56 (57%)
 Frame = -2

Query: 417 GRILRNADLIIRMCVLTLEPPLPQGFPLSLXLDCAPAPDSXQGKQQHHAERRRYHI 250
           GR++R AD +    +L L PPL      S+ +  + +P + + +++   ERRRY++
Sbjct: 46  GRVIRVADPVREGRLLLLPPPL-----FSVPVTPSESPAAARRREEDEEERRRYYL 96


>11_01_0750 - 6315126-6315896,6316371-6316784
          Length = 394

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +3

Query: 387 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADII 560
           +L  R     P+ L  A  ++      L+  F   A N++ S     +F + P++A D I
Sbjct: 88  VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146

Query: 561 NRWADEQTQGHIKT 602
           N W  + T+G + T
Sbjct: 147 NSWVKDSTKGTVTT 160


>12_01_0228 -
           1726856-1727049,1727280-1727355,1727454-1727585,
           1727665-1727775,1727892-1727942,1728114-1728275,
           1729558-1729584
          Length = 250

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 593 HKDSLSAKTKLTPPTAVAMFNVXFFQGHW 679
           H D  S+  +  P T++ +FN+    GHW
Sbjct: 205 HADPTSSVRRRIPNTSICVFNISGSTGHW 233


>11_01_0231 -
           1791754-1791947,1792178-1792253,1792352-1792483,
           1792563-1792673,1792790-1792840,1793012-1793122
          Length = 224

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 593 HKDSLSAKTKLTPPTAVAMFNVXFFQGHW 679
           H D  S+  +  P T++ +FN+    GHW
Sbjct: 179 HADPTSSVRRRIPNTSICVFNISGSTGHW 207


>01_06_1263 +
           35840502-35841308,35841763-35841969,35842272-35842370,
           35843361-35843464,35844521-35844698,35844774-35845244,
           35845383-35845523,35846290-35846349,35846427-35846490,
           35847295-35847524,35847606-35847704
          Length = 819

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 20/80 (25%), Positives = 35/80 (43%)
 Frame = +1

Query: 340 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 519
           K+  +G L +++   +  + + +N T  +  S  K   P S S   RSP +R  S  +  
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434

Query: 520 TLTSALRRMPLISSTVGRTN 579
                  ++ LIS    +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,479,013
Number of Sequences: 37544
Number of extensions: 481827
Number of successful extensions: 1206
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)