Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M09
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0659 - 5021159-5021266,5021364-5021494,5021619-5021785,502...    33   0.31 
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152...    31   0.96 
04_04_0347 + 24564589-24565296                                         29   5.1  
05_06_0143 + 25970745-25970962,25971053-25971140,25971588-259717...    29   6.7  
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265...    29   6.7  

>01_01_0659 -
           5021159-5021266,5021364-5021494,5021619-5021785,
           5021950-5022065,5022226-5022381,5022570-5022678,
           5023153-5023262,5023807-5023992,5024077-5024667
          Length = 557

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 292 KFPSIINEGRVEGDKYQISIHLPGYEQKDINVK 390
           K   ++ E +VEGD Y + +H PG+  K ++V+
Sbjct: 216 KDDEVVKEEKVEGDGYSLGLHAPGFFDKVLHVE 248


>11_06_0645 -
           25814302-25814759,25814853-25815005,25815032-25815214,
           25815342-25815531,25815624-25815784,25816136-25816623,
           25817035-25817075
          Length = 557

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
 Frame = +1

Query: 130 PRHSTTMARHIGRITITTP--FSPYVRESMLDTHSLWSNLANEMQHLDDMMKELSLKFPS 303
           P+ S+T    +G   I  P  F P   +  L  H  WS L+  + H+        L F  
Sbjct: 303 PQISSTYDGSVGLSDIGVPYRFQPDTLDKNLMHHGSWSFLS--IAHI--------LCF-- 350

Query: 304 IINEGRVEGDKYQISIHLPGYEQKDINVKAKNGVLMVQANSAFNHYLKIQNLP 462
           I ++G++EG +  I  H+P  E  D+ V + +   +   +S   H  K  N P
Sbjct: 351 ISSKGQLEGIQVVIDPHVPSVESVDMPVSSMDNSTLEVFSSQQQHSFKCNNTP 403


>04_04_0347 + 24564589-24565296
          Length = 235

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 87  MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDP 185
           M  L+   LLAA SAA   +H  ++ PY HH+ P
Sbjct: 5   MSMLLASSLLAAASAARADHHSPAYAPYPHHHAP 38


>05_06_0143 +
           25970745-25970962,25971053-25971140,25971588-25971732,
           25972014-25972101,25972179-25972381,25972774-25972913
          Length = 293

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -1

Query: 678 HXXXGRLQADVNVPHVALGGELHLFTTYXGRGRL-SGLCNWP 556
           H    R+Q D  VPH+     +H+F+    R  + +GL  WP
Sbjct: 140 HKRRARVQQDPGVPHIPYDVLVHIFSFLDMRSLVAAGLVCWP 181


>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
            2657523-2657649,2657731-2657812,2658172-2658196
          Length = 2621

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = +1

Query: 199  VRESMLDTHSLWSNLANEMQHLDDMMKELSLKFPSIINEGRVEGDKYQIS 348
            +++++L+       LA+E+Q  D ++ EL  K  S  +  R+E  + ++S
Sbjct: 1298 LKQTLLEKSGELEKLAHELQSKDSLLIELEAKIKSYADADRIEALESELS 1347


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,432,926
Number of Sequences: 37544
Number of extensions: 405742
Number of successful extensions: 1104
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)