Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_M08
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0672 + 5731288-5731356,5732032-5732117,5732634-5732724,573... 31 1.6
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 30 2.1
09_02_0252 - 6315834-6315959,6316074-6317018 30 2.1
02_02_0580 + 11757667-11758258,11758419-11758572,11758682-117587... 30 2.8
08_02_1281 - 25849918-25851099 29 3.7
12_02_0876 - 23926691-23928090,23928184-23928919,23929048-23929272 29 4.9
08_02_1118 - 24419167-24420130,24420456-24420463 29 4.9
03_05_0095 - 20745639-20745785,20745880-20746065,20746286-207463... 29 4.9
03_01_0185 - 1485023-1485733 29 4.9
02_03_0357 + 18075171-18077240 29 4.9
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 29 4.9
06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312 29 6.4
06_03_1150 + 28022633-28023374,28023501-28023565 29 6.4
01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164... 29 6.4
>12_01_0672 +
5731288-5731356,5732032-5732117,5732634-5732724,
5732886-5732935,5733339-5733408,5733508-5733617,
5733943-5734463,5734856-5734949,5735095-5735225,
5735241-5736274,5736383-5736457,5736615-5737104,
5737375-5738009,5738166-5738378
Length = 1222
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 353 ERESARGVEIADAFEDDMFGPPRTEPAARPKLSMISARLRANEERKRVIEICSQKL 520
E+E+A ++ AF + G P EPA R LS+I +R RA ++ ++ E ++KL
Sbjct: 505 EKENAFDEKLLTAFRAAI-GKPADEPAGRANLSLIKSR-RALLQKGKIRENLTKKL 558
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 359 ESARGVEIADAFEDDMFGPPRTEPAARPKLSMISARLRANEERKRVIEICSQKLENIEDP 538
+ R +E+ D + E R L + A R + KRV+ I S+K +E+P
Sbjct: 306 KKGRSIELLDPAVKSAAATEQVELLVRIGLLCVQADPRMRPDMKRVVIILSKKQSTLEEP 365
Query: 539 AR 544
R
Sbjct: 366 TR 367
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 417 GGPNMSSSKASAISTPRALSRSSCG 343
GG N +S A+A TPRAL RS+ G
Sbjct: 102 GGANPRASAAAAAGTPRALHRSTSG 126
>02_02_0580 +
11757667-11758258,11758419-11758572,11758682-11758756,
11758836-11758980,11759222-11759287,11759347-11759500,
11761506-11761624
Length = 434
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 665 PYPTSHHTPRARAFASLPSLCAPPRSTGS 579
P P HH+P A A A++ + PPR + +
Sbjct: 20 PAPPYHHSPSAAAAAAVEEVATPPRKSAA 48
>08_02_1281 - 25849918-25851099
Length = 393
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 647 HTPRARAFASLPSLCAPPRSTGSRC 573
H+P AF S PS PPR G+ C
Sbjct: 27 HSPARLAFPSSPSAARPPRRDGAYC 51
>12_02_0876 - 23926691-23928090,23928184-23928919,23929048-23929272
Length = 786
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -3
Query: 570 LIQTDLRRSRAGSSMFSNF*EQISMTRLRSSFARSRAEIMDNLGRAAGSVRGGPNMSSSK 391
L+QT RR RA ++ + L S +E + LGR+ S RGG N S S+
Sbjct: 661 LLQTKPRRGRARKRPQKKDFQKDILPNLASLSKHEVSEDLHTLGRSTPSKRGGRNGSQSR 720
>08_02_1118 - 24419167-24420130,24420456-24420463
Length = 323
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 432 AGSVRGGPNMSSSKASAISTPRALSRSSCGVISTVPRRRFDR 307
+ S R GP + ++AS ST LS SS T PRRR D+
Sbjct: 272 SSSARPGPAHTDARASTSSTTMQLSSSSTP--PTAPRRRDDQ 311
>03_05_0095 -
20745639-20745785,20745880-20746065,20746286-20746348,
20747255-20747331,20748692-20749121
Length = 300
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 680 SSGPFPYPTSHHTPRARAFASLPSLCAPPRSTG 582
+S P P+ + PR R LP LC PP+S+G
Sbjct: 27 ASDPLPHGLTLRHPRKRCHFLLPRLC-PPQSSG 58
>03_01_0185 - 1485023-1485733
Length = 236
Score = 29.1 bits (62), Expect = 4.9
Identities = 25/79 (31%), Positives = 33/79 (41%)
Frame = +2
Query: 326 GTVLMTPQEERESARGVEIADAFEDDMFGPPRTEPAARPKLSMISARLRANEERKRVIEI 505
GT+L+ + RE RGV ED P T P R + S A R R+ E
Sbjct: 90 GTLLL---QLRELERGVRALGVREDRGIRPA-TPPPPRHRRSASDASSGGRRRRGRLEEE 145
Query: 506 CSQKLENIEDPARDLRRSV 562
+ +DP D RRS+
Sbjct: 146 SVPVVTESDDPLGDFRRSM 164
>02_03_0357 + 18075171-18077240
Length = 689
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 359 ESARGVEIADAFEDDMFGPPRTEPAARPKLSMISARL-RANEERKRVIEICSQKLENIED 535
E+ARG + + FED +F P R P A L I+ R+ RA R+ C + + +++
Sbjct: 216 ETARGGPLVNPFEDQVFDPVR--PEAVDDLRAIADRMARAGYSRELADAYCGIRRDLLDE 273
>01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 468 YERTKNANESSRSALKSWRTSK 533
YER +A +S SA K WRTSK
Sbjct: 1300 YERLLSAKTNSSSAEKKWRTSK 1321
>06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312
Length = 270
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 671 PFPYPTSHHTPRARAFASLPSLCAPPRSTGSRCC 570
PFP+P+S +P ++A + P+ APP + C
Sbjct: 132 PFPFPSSPVSPPSQASPASPAAPAPPSPPQPKEC 165
>06_03_1150 + 28022633-28023374,28023501-28023565
Length = 268
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 671 PFPYPTSHHTPRARAFASLPSLCAPPRSTGSRCC 570
PFP+P+S +P ++A + P+ APP + C
Sbjct: 132 PFPFPSSPVSPPSQASPASPAAPAPPSPPQPKEC 165
>01_07_0046 -
40714701-40714763,40715266-40715343,40716398-40716462,
40717075-40717201,40717279-40717319,40717621-40717690,
40718070-40718191,40719047-40719107,40719182-40719292,
40719387-40719461,40719815-40719842,40719929-40719978,
40720228-40720290,40720385-40720426,40720562-40720631,
40720663-40720713,40721857-40722041,40722374-40722775
Length = 567
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -3
Query: 549 RSRAGSSMFSNF*EQISMTRLRSSFARSRAEIMDNLGRAAGSVRGGPNMSSSKASA 382
R R+GSS S+ +S + RSS S A LG +VR N+++ A+A
Sbjct: 13 RQRSGSSTGSSSPGGVSPSHHRSSSTSSAASAAAGLGGGVSNVRRTQNVAARAAAA 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,559,220
Number of Sequences: 37544
Number of extensions: 365658
Number of successful extensions: 1236
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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