Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M08
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012083-1|AAH12083.1|  356|Homo sapiens SERTA domain containing...    35   0.33 
AL035414-2|CAB81635.1|  356|Homo sapiens SERTA domain containing...    35   0.33 

>BC012083-1|AAH12083.1|  356|Homo sapiens SERTA domain containing 4
           protein.
          Length = 356

 Score = 35.1 bits (77), Expect = 0.33
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +2

Query: 440 PKLSMISAR-LRANEERKRVIEICSQKLENIEDPARDLRRSVCINNTYCRL 589
           P LS  S + +   EER  ++ +  +KL+ I+DP   LRRSV INN   R+
Sbjct: 89  PPLSSCSHKTISIFEERAHILYMSLEKLKFIDDPEVYLRRSVLINNLMKRI 139


>AL035414-2|CAB81635.1|  356|Homo sapiens SERTA domain containing 4
           protein.
          Length = 356

 Score = 35.1 bits (77), Expect = 0.33
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +2

Query: 440 PKLSMISAR-LRANEERKRVIEICSQKLENIEDPARDLRRSVCINNTYCRL 589
           P LS  S + +   EER  ++ +  +KL+ I+DP   LRRSV INN   R+
Sbjct: 89  PPLSSCSHKTISIFEERAHILYMSLEKLKFIDDPEVYLRRSVLINNLMKRI 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,856,921
Number of Sequences: 237096
Number of extensions: 1938783
Number of successful extensions: 9452
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9445
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)