Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M06
         (858 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    27   0.73 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   6.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   9.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   9.0  

>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 27.1 bits (57), Expect = 0.73
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 823 KSHPQIPHH*QPSELHFVKC 764
           ++H ++PHH Q  + H VKC
Sbjct: 34  QNHQRMPHHHQQQQQHQVKC 53


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 7/28 (25%), Positives = 19/28 (67%)
 Frame = +3

Query: 480 LWTIFTNKLIGADIKEVSTEPGYSDDLL 563
           LW +  N+++G  + + ++  G++DD++
Sbjct: 620 LWNLMYNEVLGLTLYDGASLIGFADDIV 647


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 480 LWTIFTNKLIGADIKEVSTEPGYSDDLL 563
           LW +  + ++G ++   +   GY+DDL+
Sbjct: 650 LWNVMYDGVLGVELPPGAELIGYADDLV 677


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = +3

Query: 480 LWTIFTNKLIGADIKEVSTEPGYSDDLL 563
           LW I  + ++  ++ E ++  GY+DD++
Sbjct: 642 LWNIMYDGVLRVELPEGASVIGYADDIV 669


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,383
Number of Sequences: 2352
Number of extensions: 13814
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)