Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M06
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    28   0.13 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.7  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   3.6  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   4.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = -2

Query: 608  NPLAFKLFIFPNFCRQEVVTITRLGADFFNVGTNKFVSKNCP**FETCGDIPTSLSLAFT 429
            N  A K F F      ++ T+     +    G  KF++ N    +E+    PT   L F 
Sbjct: 880  NKYALKFFPFDKHILDKLPTLISNYIEAVKEG--KFMNVNMLDTYESVHSFPTETGLPFV 937

Query: 428  SLFN----TRTSNFSCVFLNPSTNFLTDVKLLKFVYSK 327
              FN    T+TS      +NP   F+ +   L+  +SK
Sbjct: 938  YTFNVIKLTKTSGTVQAQINPDFAFIVNSN-LRLTFSK 974


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 455 PTSLSLAFTSLFNTRTSNFSCVFLNPSTNFLTDVKL 348
           P S  L+ T+L    + +++CV  NP+       KL
Sbjct: 669 PYSSLLSITNLAAEHSGDYTCVAANPAAEVRYTAKL 704


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -2

Query: 476 FETCGDIPTSLSLAFTSLFNTRTSNFSCVFLNPSTNFLTDV-KLLKFVYSKLTF*FFDFL 300
           F TC   PT+  +++ +LF         +++ PS  F  D+ K++   Y+ +   F  F+
Sbjct: 116 FSTCSSHPTAAFISYGTLF--------FIYVQPSATFSLDLNKVVSVFYTAVIPMFSPFI 167


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -2

Query: 476 FETCGDIPTSLSLAFTSLFNTRTSNFSCVFLNPSTNFLTDVKLLKFVY 333
           F TC   PT+  +++ +LF         ++++PS  F  D+  +  V+
Sbjct: 117 FSTCSSHPTAAFISYGTLF--------FIYVHPSATFSLDLNKVVSVF 156


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 794 SVMRNLRMTFENIDKRDIIGN 856
           S+M   RMT E + + DII N
Sbjct: 709 SLMEGPRMTAEQLKRTDIIHN 729


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,569
Number of Sequences: 438
Number of extensions: 4485
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)