Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M04
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110585-1|AAI10586.1|  975|Homo sapiens ring finger protein 20 ...    31   5.5  
BC110584-1|AAI10585.1|  975|Homo sapiens ring finger protein 20 ...    31   5.5  
AL591377-3|CAH69963.1|  977|Homo sapiens ring finger protein 20 ...    31   5.5  
AL353621-9|CAI14618.1|  977|Homo sapiens ring finger protein 20 ...    31   5.5  
AK022532-1|BAB14081.1|  975|Homo sapiens protein ( Homo sapiens ...    31   5.5  
AK022300-1|BAB14005.1|  746|Homo sapiens protein ( Homo sapiens ...    31   5.5  
AK002051-1|BAA92057.1|  333|Homo sapiens protein ( Homo sapiens ...    31   5.5  
AF265230-1|AAK58539.1|  975|Homo sapiens RING finger protein 20 ...    31   5.5  

>BC110585-1|AAI10586.1|  975|Homo sapiens ring finger protein 20
           protein.
          Length = 975

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 644 NFNHMFDAKTRHDAE-KLYSDDVRMNKRLHELLKHDKFSFADQSLT 778
           N   M   + + DA  KL S+ ++ N+ +H+LLK +K   ADQ LT
Sbjct: 746 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 790


>BC110584-1|AAI10585.1|  975|Homo sapiens ring finger protein 20
           protein.
          Length = 975

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 644 NFNHMFDAKTRHDAE-KLYSDDVRMNKRLHELLKHDKFSFADQSLT 778
           N   M   + + DA  KL S+ ++ N+ +H+LLK +K   ADQ LT
Sbjct: 746 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 790


>AL591377-3|CAH69963.1|  977|Homo sapiens ring finger protein 20
           protein.
          Length = 977

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 644 NFNHMFDAKTRHDAE-KLYSDDVRMNKRLHELLKHDKFSFADQSLT 778
           N   M   + + DA  KL S+ ++ N+ +H+LLK +K   ADQ LT
Sbjct: 748 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 792


>AL353621-9|CAI14618.1|  977|Homo sapiens ring finger protein 20
           protein.
          Length = 977

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 644 NFNHMFDAKTRHDAE-KLYSDDVRMNKRLHELLKHDKFSFADQSLT 778
           N   M   + + DA  KL S+ ++ N+ +H+LLK +K   ADQ LT
Sbjct: 748 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 792


>AK022532-1|BAB14081.1|  975|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12470 fis, clone NT2RM1000885, weakly similar to
           HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
           ).
          Length = 975

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 644 NFNHMFDAKTRHDAE-KLYSDDVRMNKRLHELLKHDKFSFADQSLT 778
           N   M   + + DA  KL S+ ++ N+ +H+LLK +K   ADQ LT
Sbjct: 746 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 790


>AK022300-1|BAB14005.1|  746|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12238 fis, clone MAMMA1001260, weakly similar to
           HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
           ).
          Length = 746

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 644 NFNHMFDAKTRHDAE-KLYSDDVRMNKRLHELLKHDKFSFADQSLT 778
           N   M   + + DA  KL S+ ++ N+ +H+LLK +K   ADQ LT
Sbjct: 517 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 561


>AK002051-1|BAA92057.1|  333|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11189 fis, clone PLACE1007547. ).
          Length = 333

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 644 NFNHMFDAKTRHDAE-KLYSDDVRMNKRLHELLKHDKFSFADQSLT 778
           N   M   + + DA  KL S+ ++ N+ +H+LLK +K   ADQ LT
Sbjct: 104 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 148


>AF265230-1|AAK58539.1|  975|Homo sapiens RING finger protein 20
           protein.
          Length = 975

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 644 NFNHMFDAKTRHDAE-KLYSDDVRMNKRLHELLKHDKFSFADQSLT 778
           N   M   + + DA  KL S+ ++ N+ +H+LLK +K   ADQ LT
Sbjct: 746 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 790


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,690,122
Number of Sequences: 237096
Number of extensions: 3125353
Number of successful extensions: 11526
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11525
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)