Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_M04
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z81067-4|CAB02976.2|  632|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical
           protein K09D9.11 protein.
          Length = 861

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -3

Query: 474 TTLKWSSAMLNRMQDILENTFLATQLKQ---MAQLRILAHSKTTYLTDS 337
           T ++WS +M   M   +   FLA  +K+   +A L ILA S+  ++ DS
Sbjct: 737 TIIQWSESMAKGMMPYMHGVFLAIVMKKCKNLASLTILATSQGGFVMDS 785


>Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical
           protein F36F2.6 protein.
          Length = 659

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -3

Query: 216 HVIGNAFRTFQIYQARRISKF 154
           HV+G  + T ++YQA R++KF
Sbjct: 399 HVVGARYGTQKVYQANRLNKF 419


>Z81067-4|CAB02976.2|  632|Caenorhabditis elegans Hypothetical
           protein F23A7.5 protein.
          Length = 632

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -2

Query: 499 SLAPGSGTHDLEMELRNAQPNARHPRKHFPGNPAQ-ANGATSH 374
           S  PG G H L+     A       R   P +P + ANG++SH
Sbjct: 241 SSTPGHGNHQLQNNYGGASSRGAQSRGSPPRDPRRHANGSSSH 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,439,330
Number of Sequences: 27780
Number of extensions: 460471
Number of successful extensions: 1222
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)