Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_L21
(890 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 40 4e-04
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 37 0.004
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 36 0.008
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 36 0.010
SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces pombe... 27 3.6
SPBC215.03c |csn1||COP9/signalosome complex subunit Csn1|Schizos... 27 4.7
SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|S... 26 6.3
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 26 8.3
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 40.3 bits (90), Expect = 4e-04
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 304 GRDFLARGQLSDALTHYHAAVEGDPHNYLT----YFKRGTVYYALGKAKFALQDFSKVLE 471
G D +G DA Y A++ DP N T Y R TV L + + AL D L
Sbjct: 230 GNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSDSDNALA 289
Query: 472 LKSDFTSARLQRANVYLKLAQYTDAKND 555
+ S + RA + L ++ +A D
Sbjct: 290 IDSSYLKGLKVRAKAHEALEKWEEAVRD 317
Score = 34.3 bits (75), Expect = 0.024
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Frame = +1
Query: 355 HAAVEGDPHNYLTYFKRGTVYYALGKAKFALQDFSKVLELKSDFTSARL----------- 501
H + +P N RG V Y G+ A+ F + L+L D T+A+
Sbjct: 167 HDVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDPDCTTAKTLFKQVRKLENT 226
Query: 502 -QRANVYLKLAQYTDAKNDYLEVTYADPYNEEAINQ-YHRIDEYIDDLRLVEAYYRGGDH 675
+ N + Y DA Y E DP N+E + + Y + L+ E D+
Sbjct: 227 KNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSDSDN 286
Query: 676 RAAVELATRLLDVSPWSAHLR--QLRAESYVALNDLFSAVSDIRS 804
A++ S++L+ ++RA+++ AL AV D++S
Sbjct: 287 ALAID-----------SSYLKGLKVRAKAHEALEKWEEAVRDVQS 320
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 36.7 bits (81), Expect = 0.004
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 301 LGRDFLARGQLSDALTHYHAAVEGDPHNYLTYFKRGTVYYALGKAKFALQDFSKVLELKS 480
+GR ++A+ + + A Y AV D N + G +YY + + + AL +S+ + L
Sbjct: 590 IGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNP 649
Query: 481 DFTSARLQRANVYLKL-AQYTDAKNDYLEVTYADPYN 588
+ +Y Q +DA + Y DP N
Sbjct: 650 YISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTN 686
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 35.9 bits (79), Expect = 0.008
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 340 ALTHYHAAVEGDPHNYLTYFKRGTVYYALGKAKFALQDFSKVLELKSDFTSAR--LQRAN 513
A+ A+E DP YF+R T + A+ + K A+ DF K L L +AR L+
Sbjct: 58 AINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSDPAARKKLRECE 117
Query: 514 VYLKLAQYTDA 546
+K ++ +A
Sbjct: 118 QLVKRIRFQEA 128
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 35.5 bits (78), Expect = 0.010
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +1
Query: 301 LGRDFLARGQLSDALTHYHAAVEGDPHNYLTYFKRGTVYYALGKAKFALQDFSKVLELKS 480
LG+ + +G L A+ ++ +++ +P +Y T+F G L K A++ FS+ L +
Sbjct: 527 LGKYYYKKGDLLQAMNCFNESLKINPLSYPTWFTYGCAALELQKYDAAMEAFSRCLSINP 586
Query: 481 DFTSARLQRANVYLKLAQYT 540
+ + A+ LK +T
Sbjct: 587 EDGESWNNLASAMLKAKDHT 606
>SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 463 VLELKSDFTSARLQRANVYLKLAQYTDAKNDYLEVTYADPYNEE 594
+L K D ARL + +KL T ++DYL + PY +
Sbjct: 386 MLPKKLDEEVARLHLGKLGVKLTTLTSVQSDYLGIPVDGPYKAD 429
>SPBC215.03c |csn1||COP9/signalosome complex subunit
Csn1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -3
Query: 441 EFCFSEGIIHCTSLEVCKIVVWISFDSCVIM--SQSVRELSSSQEVSTQL 298
E+C + G I SLE+ +I +WI S V+ S++ +S++ E+++ +
Sbjct: 140 EYCTNAGQIAHLSLELMRISIWIGNYSHVLAFGSRAKSTVSAAMELTSPI 189
>SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor
Vma6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 643 LVEAYYRGGDHRAAVELATRLLD 711
LVE YY H AA++L T+L D
Sbjct: 536 LVEYYYGKSLHEAALDLLTKLCD 558
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 135 TMKLFSIQNYYLTDPRSIFRSSLFVF 58
T +F ++NY LTD + RS L VF
Sbjct: 82 TNMVFDLENYDLTDLDNFDRSKLLVF 107
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,951,203
Number of Sequences: 5004
Number of extensions: 53431
Number of successful extensions: 189
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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