Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_L21
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   2.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 547 KNDYLEVTYADPYNEEAINQYHRIDEYIDDLRL 645
           KND  E    +PY    +N  ++ID  I+ +R+
Sbjct: 83  KNDESESPKLNPYPNWEMNDINKIDSIINIIRV 115


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +1

Query: 151 SVVINLRFIMDYLASISWNKVTPCLVFLIFEVVLEFSECATQAEVNK 291
           S  +NL    D  A+++ N    C   +    V+   EC   A+V++
Sbjct: 135 SAFVNLTAYYDGGANLNLNGTVNCTSSIASSGVVSAGECGPAADVDE 181


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 628 IDDLRLVEAYYRGGDH 675
           +DD+  +E  Y+ GDH
Sbjct: 741 LDDIASMEILYKPGDH 756


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,671
Number of Sequences: 438
Number of extensions: 3984
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)