Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_L19
         (891 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81599-1|AAB39863.1|  284|Homo sapiens homeodomain protein HOXB1...    31   4.2  
U57052-1|AAC50664.1|  284|Homo sapiens Hoxb-13 protein.                31   4.2  
BT007410-1|AAP36078.1|  284|Homo sapiens homeo box B13 protein.        31   4.2  
BC070233-1|AAH70233.1|  284|Homo sapiens HOXB13 protein protein.       31   4.2  
BC007092-1|AAH07092.1|  284|Homo sapiens homeobox B13 protein.         31   4.2  
AY937237-1|AAY17396.1|  284|Homo sapiens PSGD protein protein.         31   4.2  

>U81599-1|AAB39863.1|  284|Homo sapiens homeodomain protein HOXB13
           protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 180 TNTASTFFGFYGARLWYCTAERDGXKPSQEXRQTAWLPAEKQT-GKKXEGRP 28
           T+ A   +G++G   + C   R   KP  +    A  PAE  T G++   RP
Sbjct: 73  TSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAYPAETPTAGEEYPSRP 124


>U57052-1|AAC50664.1|  284|Homo sapiens Hoxb-13 protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 180 TNTASTFFGFYGARLWYCTAERDGXKPSQEXRQTAWLPAEKQT-GKKXEGRP 28
           T+ A   +G++G   + C   R   KP  +    A  PAE  T G++   RP
Sbjct: 73  TSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAYPAETPTAGEEYPSRP 124


>BT007410-1|AAP36078.1|  284|Homo sapiens homeo box B13 protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 180 TNTASTFFGFYGARLWYCTAERDGXKPSQEXRQTAWLPAEKQT-GKKXEGRP 28
           T+ A   +G++G   + C   R   KP  +    A  PAE  T G++   RP
Sbjct: 73  TSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAYPAETPTAGEEYPSRP 124


>BC070233-1|AAH70233.1|  284|Homo sapiens HOXB13 protein protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 180 TNTASTFFGFYGARLWYCTAERDGXKPSQEXRQTAWLPAEKQT-GKKXEGRP 28
           T+ A   +G++G   + C   R   KP  +    A  PAE  T G++   RP
Sbjct: 73  TSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAYPAETPTAGEEYPSRP 124


>BC007092-1|AAH07092.1|  284|Homo sapiens homeobox B13 protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 180 TNTASTFFGFYGARLWYCTAERDGXKPSQEXRQTAWLPAEKQT-GKKXEGRP 28
           T+ A   +G++G   + C   R   KP  +    A  PAE  T G++   RP
Sbjct: 73  TSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAYPAETPTAGEEYPSRP 124


>AY937237-1|AAY17396.1|  284|Homo sapiens PSGD protein protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 180 TNTASTFFGFYGARLWYCTAERDGXKPSQEXRQTAWLPAEKQT-GKKXEGRP 28
           T+ A   +G++G   + C   R   KP  +    A  PAE  T G++   RP
Sbjct: 73  TSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAYPAETPTAGEEYPSRP 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,802,419
Number of Sequences: 237096
Number of extensions: 1944353
Number of successful extensions: 3338
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3338
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)