Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_L12
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.22
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.0
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 3.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of... 29 6.2
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.22
Identities = 34/125 (27%), Positives = 41/125 (32%), Gaps = 7/125 (5%)
Frame = +1
Query: 574 IPXPPKG--PXTEKXPRSAGVXP*APPPXRASQ-KXTLXXXGGETRQEYKDPGVPPXXPX 744
+P PP P P + G+ P PPP + G T PG+PP P
Sbjct: 263 VPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Query: 745 XALLFRPCXL--PDPCPPFSLREXWXXXIPHPVRIXXRCXS--PPPXPGXCPXTPXSXXP 912
F P + P PP +R P P R PPP P P P
Sbjct: 323 SR--FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGM 380
Query: 913 XAPIP 927
P P
Sbjct: 381 IPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.22
Identities = 34/125 (27%), Positives = 41/125 (32%), Gaps = 7/125 (5%)
Frame = +1
Query: 574 IPXPPKG--PXTEKXPRSAGVXP*APPPXRASQ-KXTLXXXGGETRQEYKDPGVPPXXPX 744
+P PP P P + G+ P PPP + G T PG+PP P
Sbjct: 273 VPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Query: 745 XALLFRPCXL--PDPCPPFSLREXWXXXIPHPVRIXXRCXS--PPPXPGXCPXTPXSXXP 912
F P + P PP +R P P R PPP P P P
Sbjct: 333 SR--FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGM 390
Query: 913 XAPIP 927
P P
Sbjct: 391 IPPPP 395
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.0
Identities = 32/121 (26%), Positives = 39/121 (32%)
Frame = +1
Query: 565 EHVIPXPPKGPXTEKXPRSAGVXP*APPPXRASQKXTLXXXGGETRQEYKDPGVPPXXPX 744
+ P PP P P+ A P APPP Q Y VP P
Sbjct: 46 QQTAPPPPPAPY----PQQAVPAP-APPPAPYPQHAV--PAPAPPLASYPQNAVPVPAPP 98
Query: 745 XALLFRPCXLPDPCPPFSLREXWXXXIPHPVRIXXRCXSPPPXPGXCPXTPXSXXPXAPI 924
A + +P P PP + P P + + PPP P P P P P
Sbjct: 99 PAP-YPQHAVPAPAPPPAPYPQHAVPAPAPYQ---QQPPPPPPPPHYPPPPPHYPPPPPA 154
Query: 925 P 927
P
Sbjct: 155 P 155
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/95 (27%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Frame = +1
Query: 643 PPPXRASQKXTLXXXGGETRQEYKDPGVPPXXPXXALLFRPCXLPDPCPPFSLREXWXXX 822
PPP + + GG + G PP + P P P PP L
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGP---PPPPPPGGLPPITGGP 742
Query: 823 IPHPVR-----IXXRCXSPPPXPGXCPXTPXSXXP 912
P P I PPP PG CP P P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/95 (27%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Frame = +1
Query: 643 PPPXRASQKXTLXXXGGETRQEYKDPGVPPXXPXXALLFRPCXLPDPCPPFSLREXWXXX 822
PPP + + GG + G PP + P P P PP L
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGP---PPPPPPGGLPPITGGP 742
Query: 823 IPHPVR-----IXXRCXSPPPXPGXCPXTPXSXXP 912
P P I PPP PG CP P P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/95 (27%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Frame = +1
Query: 643 PPPXRASQKXTLXXXGGETRQEYKDPGVPPXXPXXALLFRPCXLPDPCPPFSLREXWXXX 822
PPP + + GG + G PP + P P P PP L
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGP---PPPPPPGGLPPITGGP 325
Query: 823 IPHPVR-----IXXRCXSPPPXPGXCPXTPXSXXP 912
P P I PPP PG CP P P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 763 PCXLPDPCPPFSLREXWXXXIPHPVRIXXRCXSPPPXPGXCP-XTPXSXXPXAPIP 927
P P P PP R P P + SPPP P P TP S P P P
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEV---SKSPPPPPPLPPIATPSSVPPPPPPP 511
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Frame = +1
Query: 577 PXPPKGPXTEKXPRSAGVX--P*APP--PXRASQKXTLXXXGGETRQEYKDPGVPPXXPX 744
P PP P T K P S G PP P A + + Q + PP P
Sbjct: 435 PPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
Query: 745 XALLFRPCXLPDPCPP 792
+ P +P P PP
Sbjct: 495 LPPIATPSSVPPPPPP 510
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +1
Query: 718 PGVPPXXPXXALLFRPCXLPDPCPPFSLREXWXXXIPHPVRIXXRCXSPPPXPGXCPXTP 897
P PP P A PC P CPP P P C PPP P +P
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMC--PPPPPPMPSYSP 86
Query: 898 XSXXPXAPI 924
AP+
Sbjct: 87 CQSYAPAPV 95
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +1
Query: 721 GVPPXXPXXALLFRPCXLPDPCPPFSLREXWXXXIPHPVRIXXRCXSPPPXPGXCPXTPX 900
G PP P + P LP P PP + P P PPP P CP P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQ----FCPPPPMCPP--PPPPPPPPMCPPPPP 79
Query: 901 SXXPXAP 921
+P
Sbjct: 80 PMPSYSP 86
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 763 PCXLPDPCPPFSLREXWXXXIPHPVRIXXRCXSPPPXPGXCP-XTPXSXXPXAPIP 927
P P P PP R P P + SPPP P P TP S P P P
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEV---SKSPPPPPPLPPIATPSSVPPPPPPP 518
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Frame = +1
Query: 577 PXPPKGPXTEKXPRSAG--VXP*APP--PXRASQKXTLXXXGGETRQEYKDPGVPPXXPX 744
P PP P T K P S G PP P A + + Q + PP P
Sbjct: 442 PPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
Query: 745 XALLFRPCXLPDPCPP 792
+ P +P P PP
Sbjct: 502 LPPIATPSSVPPPPPP 517
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.6
Identities = 32/120 (26%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = +1
Query: 577 PXPPKGPXTEKXPRSAGVXP*APPPXRASQKXTLXXXGGETRQEYKDP-GVPPXXPXXAL 753
P P P P P PPP A +P V P P A
Sbjct: 28 PCPEPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPMPVAPPAPAPAY 87
Query: 754 LFRPCXLPDPCP-PFSLREXWXXXIPHPVRIXXRCXSPPPXPGXCPXTPXS-XXPXAPIP 927
PC P PCP P+ P PV C +PP P P + P P P
Sbjct: 88 NPYPCATP-PCPLPYIPEPVAPVPAPAPVYEPYACAAPPCPPPTPVYEPYACAAPPCPAP 146
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 729 PXXPXXRSSVPXLPLTGPXSAFLPSGXVAXSHTXPCTYLXPVXVAPPXP 875
P P + +P P+ P A+ P PC + P+ VAPP P
Sbjct: 39 PPCPPQYAPLPPPPMPAPAPAYNPYPCA----NPPCIVVEPMPVAPPAP 83
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 853 CXSPPPXPGXCPXTPXSXXPXAPIP 927
C +P P P CP P + P P P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPPP 95
>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
constitutive dauerformation protein 2 protein.
Length = 1446
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 626 PAERGXFSVXGPFGGXGITCSLL 558
P E+G +V G FGG G +C +L
Sbjct: 772 PGEKGESTVFGGFGGGGNSCGML 794
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,990,089
Number of Sequences: 27780
Number of extensions: 149322
Number of successful extensions: 445
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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