Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_L06
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 44 1e-04
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 44 1e-04
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 44 1e-04
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 43 4e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 41 0.001
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 41 0.001
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 40 0.003
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 36 0.042
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.13
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 34 0.13
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 34 0.13
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 33 0.22
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.29
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 33 0.39
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.39
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 33 0.39
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 32 0.51
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 32 0.51
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 0.90
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 0.90
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.90
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.90
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 0.90
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 0.90
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.90
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 0.90
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.2
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 31 1.2
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 31 1.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.2
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.6
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 30 2.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.7
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 30 2.7
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.6
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 29 3.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 3.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 3.6
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 29 6.3
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 6.3
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.3
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 6.3
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 46.4 bits (105), Expect = 3e-05
Identities = 44/157 (28%), Positives = 50/157 (31%), Gaps = 1/157 (0%)
Frame = +1
Query: 469 GFWGPXPXPXPXXPGPGXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRXPXRASNPXK 648
GF P P GP G PP G + P P +
Sbjct: 286 GFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQ 345
Query: 649 GPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXG 828
G FG APPP+ P GG PP +PG F P F+ P G
Sbjct: 346 GSFG-----APPPQQFHAPS--PQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFG 398
Query: 829 XP-GPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPPP 936
P GP G + PP GG P PG PP
Sbjct: 399 APQGP-------GGPGGYGPPPPGG--PGAPGSYGPP 426
Score = 32.7 bits (71), Expect = 0.39
Identities = 28/110 (25%), Positives = 31/110 (28%), Gaps = 2/110 (1%)
Frame = +1
Query: 442 PPXPXXXGXGFWGPXPXPXPXXP-GPGXXXXXXXXXXXXXXXXGXPPXXGXX-PEKTXXP 615
PP P G + P P P P G PP G P P
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 616 RXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGP 765
+ P P GG PPP PP G P G + GP
Sbjct: 427 QGGPGGFGPP--PPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARGP 474
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -3
Query: 598 PGXPPXLGXXXXPPPGG-GXXXXPHPKXRGRGXWXXXXXXGPKTQXPXPXG 449
P P G PPPGG G P G G + GP P P G
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTG 450
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/103 (29%), Positives = 31/103 (30%)
Frame = +1
Query: 628 RASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFS 807
R + P P PP PP G PP SP P P P S
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 808 RPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPPP 936
P G P P P P P GG P G PPP
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Score = 37.1 bits (82), Expect = 0.018
Identities = 29/99 (29%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Frame = +1
Query: 481 PXPXPXPXXPGPGXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRXPXRASNPXKGPFG 660
P P P G G G PP P T P P +P P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-----PPPTGSPPPPPAGGSPPP-PRA 294
Query: 661 GXXXXAPPPRXXXXKXX-PPXXXGGNPPGALXSPGPFPP 774
G PPPR PP GG+PP A P PP
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/103 (29%), Positives = 31/103 (30%)
Frame = +1
Query: 628 RASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFS 807
R + P P PP PP G PP SP P P P S
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 808 RPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPPP 936
P G P P P P P GG P G PPP
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Score = 37.1 bits (82), Expect = 0.018
Identities = 29/99 (29%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Frame = +1
Query: 481 PXPXPXPXXPGPGXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRXPXRASNPXKGPFG 660
P P P G G G PP P T P P +P P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-----PPPTGSPPPPPAGGSPPP-PRA 315
Query: 661 GXXXXAPPPRXXXXKXX-PPXXXGGNPPGALXSPGPFPP 774
G PPPR PP GG+PP A P PP
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/103 (29%), Positives = 31/103 (30%)
Frame = +1
Query: 628 RASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFS 807
R + P P PP PP G PP SP P P P S
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 808 RPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPPP 936
P G P P P P P GG P G PPP
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Score = 37.1 bits (82), Expect = 0.018
Identities = 29/99 (29%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Frame = +1
Query: 481 PXPXPXPXXPGPGXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRXPXRASNPXKGPFG 660
P P P G G G PP P T P P +P P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-----PPPTGSPPPPPAGGSPPP-PRA 300
Query: 661 GXXXXAPPPRXXXXKXX-PPXXXGGNPPGALXSPGPFPP 774
G PPPR PP GG+PP A P PP
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 42.7 bits (96), Expect = 4e-04
Identities = 37/129 (28%), Positives = 40/129 (31%), Gaps = 8/129 (6%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALX 753
PP P + P P R NP G PPP+ K P PPG
Sbjct: 112 PPGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKG 171
Query: 754 SPGPFPP*XTP----XXALPF----SRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXP 909
PGP T LP S P G PG P G + PP P
Sbjct: 172 LPGPQGDAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKG-PTGEPGKVINGAPPGPPGPP 230
Query: 910 XXPGGXPPP 936
PG PP
Sbjct: 231 GPPGPQGPP 239
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/121 (27%), Positives = 34/121 (28%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALX 753
PP P P P P P G PPP PP G PP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP-PPGRTPGPPGMPGMPPPPPPS 323
Query: 754 SPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPP 933
GP P P R P P +P G G P P P G PP
Sbjct: 324 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Query: 934 P 936
P
Sbjct: 384 P 384
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/102 (26%), Positives = 28/102 (27%), Gaps = 2/102 (1%)
Frame = +1
Query: 442 PPXPXXXGXGFWGPXPXPXPXXPGPGXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRX 621
P P G W P P P P PG G P G P R
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRT-PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 343
Query: 622 P--XRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPP 741
P P + P G PPP PP G PP
Sbjct: 344 PGGMPPPPPPRYPSAGPGMYPPPP--PSRPPAPPSGHGMIPP 383
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +1
Query: 712 PPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPP 891
PP G G P PP +P P P P P G P PP
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPP--SSGMWPPPPPP 302
Query: 892 XGGXXPXXPG--GXPPP 936
G P PG G PPP
Sbjct: 303 PPGRTPGPPGMPGMPPP 319
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/121 (27%), Positives = 34/121 (28%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALX 753
PP P P P P P G PPP PP G PP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP-PPGRTPGPPGMPGMPPPPPPS 333
Query: 754 SPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPP 933
GP P P R P P +P G G P P P G PP
Sbjct: 334 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Query: 934 P 936
P
Sbjct: 394 P 394
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/102 (26%), Positives = 28/102 (27%), Gaps = 2/102 (1%)
Frame = +1
Query: 442 PPXPXXXGXGFWGPXPXPXPXXPGPGXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRX 621
P P G W P P P P PG G P G P R
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRT-PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 353
Query: 622 P--XRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPP 741
P P + P G PPP PP G PP
Sbjct: 354 PGGMPPPPPPRYPSAGPGMYPPPP--PSRPPAPPSGHGMIPP 393
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +1
Query: 712 PPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPP 891
PP G G P PP +P P P P P G P PP
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPP--SSGMWPPPPPP 312
Query: 892 XGGXXPXXPG--GXPPP 936
G P PG G PPP
Sbjct: 313 PPGRTPGPPGMPGMPPP 329
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 39.5 bits (88), Expect = 0.003
Identities = 35/124 (28%), Positives = 36/124 (29%), Gaps = 3/124 (2%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAP--PPRXXXXKXXPPXXXG-GNPPG 744
PP G P K P P NP G P PP PP G PG
Sbjct: 121 PPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPG 180
Query: 745 ALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGG 924
PGP P P + P G PG P G GG P G
Sbjct: 181 EPGGPGPAGSPAGPSGPGP-AGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAG 239
Query: 925 XPPP 936
P P
Sbjct: 240 PPGP 243
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 35.9 bits (79), Expect = 0.042
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 640 PXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPG-ALXSPGPFPP 774
P G G PPPR PP GG PP + PGP PP
Sbjct: 1561 PPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPP 1606
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +1
Query: 568 GXPPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPP 741
G PP G P P R + +GP PPPR PP GG PP
Sbjct: 1558 GLPPPHGGMNGWRGGP-PPPRGGSHCQGP--PPLMGGPPPRLGMPPPGPPPPNGGPPP 1612
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 34.3 bits (75), Expect = 0.13
Identities = 36/122 (29%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPG---- 762
P K P P P K P PPP PP G PPGA PG
Sbjct: 116 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPP-CKPCPQGPPGPPG--PPGAPGDPGEAGT 172
Query: 763 PFPP*XTPXXALPFSR----PXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXP 930
P P P R P G PGP P G P P P G
Sbjct: 173 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEP--GTPAISEPLTPGAPGEPGDSGPPG 230
Query: 931 PP 936
PP
Sbjct: 231 PP 232
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 494 PXPXPPAPXLXVGGXXXPPPR-GGXXXXPQXRGXPRKKPFXQGXPXGPQ 637
P PP P + GG PPP GG P G P P G PQ
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQ 128
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = +1
Query: 682 PPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWG 861
PP PP GG PP G PP +P P G P P P
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIP--PPPPMFGAPPPPPPP--- 120
Query: 862 XGXXVFPXPP 891
G V P PP
Sbjct: 121 SGLGVAPQPP 130
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 34.3 bits (75), Expect = 0.13
Identities = 36/122 (29%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPG---- 762
P K P P P K P PPP PP G PPGA PG
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPP-CKPCPQGPPGPPG--PPGAPGDPGEAGT 167
Query: 763 PFPP*XTPXXALPFSR----PXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXP 930
P P P R P G PGP P G P P P G
Sbjct: 168 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEP--GTPAISEPLTPGAPGEPGDSGPPG 225
Query: 931 PP 936
PP
Sbjct: 226 PP 227
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 34.3 bits (75), Expect = 0.13
Identities = 36/122 (29%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPG---- 762
P K P P P K P PPP PP G PPGA PG
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPP-CKPCPQGPPGPPG--PPGAPGDPGEAGT 167
Query: 763 PFPP*XTPXXALPFSR----PXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXP 930
P P P R P G PGP P G P P P G
Sbjct: 168 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEP--GTPAISEPLTPGAPGEPGDSGPPG 225
Query: 931 PP 936
PP
Sbjct: 226 PP 227
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 33.5 bits (73), Expect = 0.22
Identities = 35/127 (27%), Positives = 39/127 (30%), Gaps = 7/127 (5%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXP----PXXXGGN-- 735
PP + P P NP + P PPP + P P GN
Sbjct: 99 PPGTPGSAGRPGKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKG 158
Query: 736 PPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFW-GXGXXVFPXPPXGGXXPX 912
P G PGP P P P + P G PGP P G P P P
Sbjct: 159 PLGPPGPPGPEGPNGEPGNKGP-AGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPG 217
Query: 913 XPGGXPP 933
PG P
Sbjct: 218 QPGQRGP 224
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 33.1 bits (72), Expect = 0.29
Identities = 35/127 (27%), Positives = 39/127 (30%), Gaps = 7/127 (5%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXP----PXXXGGN-- 735
PP + P P NP + P PPP + P P GN
Sbjct: 97 PPGTPGRAGRPGKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKG 156
Query: 736 PPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFW-GXGXXVFPXPPXGGXXPX 912
P G PGP P T P + P G PGP P G P P P
Sbjct: 157 PLGPPGPPGPEGPNGTAGNKGP-AGPPGPGGKPGPAGPPGENGRNGEPQPGSPGEPGRPG 215
Query: 913 XPGGXPP 933
PG P
Sbjct: 216 QPGSRGP 222
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 33.1 bits (72), Expect = 0.29
Identities = 38/134 (28%), Positives = 40/134 (29%), Gaps = 13/134 (9%)
Frame = +1
Query: 574 PPXXGXX--PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGA 747
PP G + T P P A P P PPP PP G PP
Sbjct: 671 PPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQ 730
Query: 748 LXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXP--- 918
P F P P P + G P P F FP PP GG P
Sbjct: 731 GIPPMGFDPNKPPP---PMFQQGFNAGAP-PPPFGRGAGPMSSFPPPPRGGMHHMPPPPS 786
Query: 919 --------GGXPPP 936
GG PPP
Sbjct: 787 FRGGRGGHGGPPPP 800
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.39
Identities = 35/129 (27%), Positives = 37/129 (28%), Gaps = 6/129 (4%)
Frame = +1
Query: 568 GXPPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPP--PRXXXXKXXPPXXXGGNPP 741
G P G P P+ P A GP G PP P P PP
Sbjct: 183 GPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPP 242
Query: 742 GALXSPG----PFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXP 909
G +PG P PP P P G PG P G P G
Sbjct: 243 GIPGAPGQPGRPGPP-GEPGTYKTEVGPAGRAGAPGRPGPP--GQPGPAGPPGENGKGGG 299
Query: 910 XXPGGXPPP 936
P G P P
Sbjct: 300 QGPSGLPGP 308
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.7 bits (71), Expect = 0.39
Identities = 47/178 (26%), Positives = 52/178 (29%), Gaps = 14/178 (7%)
Frame = +1
Query: 442 PPXPXXXGX--GFWGPXPXPXPXXPGPGXXXXXXXXXXXXXXXXGXP-PXXGXXPEKTXX 612
PP P G G GP P P PG P P P ++
Sbjct: 61 PPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRPSRSPH 120
Query: 613 PRXPX--RASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXX--GGNPPGALXSPGPFPP*X 780
P A++ + FG PP P G PPG L P PP
Sbjct: 121 SDAPEPSAATDGFELVFGKHHSTGAPPSGGPPGPFDPSGAPPSGGPPG-LFDPSGAPPSG 179
Query: 781 TPXXALPFSRPXXXXGXPGP----XXFPFWGXGXXVFP--XPPXGG-XXPXXPGGXPP 933
P S G PGP P G P PP GG P P G PP
Sbjct: 180 GPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPP 237
Score = 31.9 bits (69), Expect = 0.68
Identities = 39/132 (29%), Positives = 42/132 (31%), Gaps = 10/132 (7%)
Frame = +1
Query: 568 GXPPXXGXXPEKTXXPRXPXRASNPXKGPFG--GXXXXAPPPRXXXXKXXPPXXXGG--- 732
G PP G P P + P GPF G PP PP GG
Sbjct: 444 GAPPSGG--PPGPFNPSGAPPSGGPP-GPFNPSGAPPSGGPPGPFDPSGAPPS--GGPPG 498
Query: 733 --NPPGALXS---PGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXG 897
NP GA S PGPF P P +P P P P +F P
Sbjct: 499 PFNPSGAPPSGGPPGPFDPSGAPPSGMP--PVPLPTDLPIPSESP--SFFQWIFGRPKPS 554
Query: 898 GXXPXXPGGXPP 933
G P G PP
Sbjct: 555 GPAGPAPSGEPP 566
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 32.7 bits (71), Expect = 0.39
Identities = 35/129 (27%), Positives = 37/129 (28%), Gaps = 6/129 (4%)
Frame = +1
Query: 568 GXPPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPP--PRXXXXKXXPPXXXGGNPP 741
G P G P P+ P A GP G PP P P PP
Sbjct: 164 GPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPP 223
Query: 742 GALXSPG----PFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXP 909
G +PG P PP P P G PG P G P G
Sbjct: 224 GIPGAPGQPGRPGPP-GEPGTYKTEVGPAGRAGAPGRPGPP--GQPGPAGPPGENGKGGG 280
Query: 910 XXPGGXPPP 936
P G P P
Sbjct: 281 QGPSGLPGP 289
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.51
Identities = 33/116 (28%), Positives = 41/116 (35%), Gaps = 2/116 (1%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP 774
P++ + S GP GG PPP+ PP G P G PG +PP
Sbjct: 654 PQQQQQHQAQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPP--GQPYG---PPGGYPP 708
Query: 775 --*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPPP 936
P A P+ G P P +G +P PP G P G PP
Sbjct: 709 QQQRPPYQAQPY------PGPPPPQQQRGYG-----YPPPPQPGHPYQQPYGQMPP 753
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.51
Identities = 33/116 (28%), Positives = 41/116 (35%), Gaps = 2/116 (1%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP 774
P++ + S GP GG PPP+ PP G P G PG +PP
Sbjct: 654 PQQQQQHQAQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPP--GQPYG---PPGGYPP 708
Query: 775 --*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPPP 936
P A P+ G P P +G +P PP G P G PP
Sbjct: 709 QQQRPPYQAQPY------PGPPPPQQQRGYG-----YPPPPQPGHPYQQPYGQMPP 753
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.90
Identities = 32/114 (28%), Positives = 35/114 (30%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP 774
P + P P NP + P PPP + P PPG PG P
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPG--SP 171
Query: 775 *XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPPP 936
A P P G PGP P G P P P PG PP
Sbjct: 172 GLPGQDAAP-GEP-GPKGPPGPPGAP-GAPGTPGEPGVP-AQSEPLIPGEPGPP 221
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.5 bits (68), Expect = 0.90
Identities = 29/90 (32%), Positives = 30/90 (33%), Gaps = 8/90 (8%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPG---- 762
P K P P + P K P PPP PP G PPGA PG
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPP-CKPCPQGPPGPPG--PPGAPGDPGEAGT 174
Query: 763 PFPP*XTPXXALPFSR----PXXXXGXPGP 840
P P LP R P G PGP
Sbjct: 175 PGRPGTDATPGLPGPRGPPGPPGEAGQPGP 204
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.90
Identities = 27/87 (31%), Positives = 27/87 (31%)
Frame = +1
Query: 676 APPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPF 855
AP PP G PP L PP P LP P P P
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPPPPPGGLPP 753
Query: 856 WGXGXXVFPXPPXGGXXPXXPGGXPPP 936
G P PP GG P P PPP
Sbjct: 754 ISGGPPP-PPPPPGGCPPPPP--PPPP 777
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/76 (32%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +1
Query: 715 PXXXGGNPPGALXSPGPFPP*X--TPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXP 888
P GG PP PG PP P P P G P P P G P P
Sbjct: 720 PPITGGPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP---GGCPPPPPP 774
Query: 889 PXGGXXPXXPGGXPPP 936
P G P PPP
Sbjct: 775 PPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 494 PXPXPPAPXL--XVGGXXXPPPRGGXXXXPQXRGXPRKKPFXQGXPXGPQTLXKGXLVG 664
P P PP L GG PPP GG P G P P G P P G G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = +1
Query: 712 PPXXXGGNPPGALXSPGPFPP*XTPXXAL-PFSRPXXXXG-XPGPXXFPFWGXGXXVFPX 885
PP GG PP P P PP P + P P G P P P G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 886 PPXGGXXPXXP 918
PP G P P
Sbjct: 788 PPPGMFAPMAP 798
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGG--NPPGA 747
PP G P P P P P G PPP PP GG P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLP---PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 748 LXSPGPFPP 774
PG F P
Sbjct: 787 PPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/85 (29%), Positives = 27/85 (31%)
Frame = +1
Query: 682 PPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWG 861
PP P GG+ + GP PP P P G P P G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-----PITG 740
Query: 862 XGXXVFPXPPXGGXXPXXPGGXPPP 936
P PP GG P G PPP
Sbjct: 741 GPP---PPPPPGGLPPISGGPPPPP 762
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +2
Query: 494 PXPXPPAPXLXVGGXXXPPPRGGXXXXPQXRGXPRKKPFXQGXP 625
P P P P + GG PPP GG P G P P G P
Sbjct: 713 PPPPPGLPPI-TGGPPPPPPPGG---LPPITGGPPPPPPPGGLP 752
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.90
Identities = 27/87 (31%), Positives = 27/87 (31%)
Frame = +1
Query: 676 APPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPF 855
AP PP G PP L PP P LP P P P
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPPPPPGGLPP 753
Query: 856 WGXGXXVFPXPPXGGXXPXXPGGXPPP 936
G P PP GG P P PPP
Sbjct: 754 ISGGPPP-PPPPPGGCPPPPP--PPPP 777
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/76 (32%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +1
Query: 715 PXXXGGNPPGALXSPGPFPP*X--TPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXP 888
P GG PP PG PP P P P G P P P G P P
Sbjct: 720 PPITGGPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP---GGCPPPPPP 774
Query: 889 PXGGXXPXXPGGXPPP 936
P G P PPP
Sbjct: 775 PPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 494 PXPXPPAPXL--XVGGXXXPPPRGGXXXXPQXRGXPRKKPFXQGXPXGPQTLXKGXLVG 664
P P PP L GG PPP GG P G P P G P P G G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = +1
Query: 712 PPXXXGGNPPGALXSPGPFPP*XTPXXAL-PFSRPXXXXG-XPGPXXFPFWGXGXXVFPX 885
PP GG PP P P PP P + P P G P P P G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 886 PPXGGXXPXXP 918
PP G P P
Sbjct: 788 PPPGMFAPMAP 798
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGG--NPPGA 747
PP G P P P P P G PPP PP GG P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLP---PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 748 LXSPGPFPP 774
PG F P
Sbjct: 787 PPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/85 (29%), Positives = 27/85 (31%)
Frame = +1
Query: 682 PPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWG 861
PP P GG+ + GP PP P P G P P G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-----PITG 740
Query: 862 XGXXVFPXPPXGGXXPXXPGGXPPP 936
P PP GG P G PPP
Sbjct: 741 GPP---PPPPPGGLPPISGGPPPPP 762
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +2
Query: 494 PXPXPPAPXLXVGGXXXPPPRGGXXXXPQXRGXPRKKPFXQGXP 625
P P P P + GG PPP GG P G P P G P
Sbjct: 713 PPPPPGLPPI-TGGPPPPPPPGG---LPPITGGPPPPPPPGGLP 752
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = +1
Query: 586 GXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGP 765
G P PR P A P P PPP PP PP + P P
Sbjct: 28 GGCPTPMCQPRMPCAAPMPMPMPM---PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPP 84
Query: 766 FPP*XTPXXALPFSRP 813
PP P RP
Sbjct: 85 PPPMPRPSCPCMMQRP 100
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.90
Identities = 32/114 (28%), Positives = 35/114 (30%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP 774
P + P P NP + P PPP + P PPG PG P
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPG--SP 171
Query: 775 *XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPPP 936
A P P G PGP P G P P P PG PP
Sbjct: 172 GLPGQDAAP-GEP-GPKGPPGPPGAP-GAPGTPGEPGVP-AQSEPLIPGEPGPP 221
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.90
Identities = 27/87 (31%), Positives = 27/87 (31%)
Frame = +1
Query: 676 APPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPF 855
AP PP G PP L PP P LP P P P
Sbjct: 278 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPPPPPGGLPP 336
Query: 856 WGXGXXVFPXPPXGGXXPXXPGGXPPP 936
G P PP GG P P PPP
Sbjct: 337 ISGGPPP-PPPPPGGCPPPPP--PPPP 360
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/76 (32%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +1
Query: 715 PXXXGGNPPGALXSPGPFPP*X--TPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXP 888
P GG PP PG PP P P P G P P P G P P
Sbjct: 303 PPITGGPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP---GGCPPPPPP 357
Query: 889 PXGGXXPXXPGGXPPP 936
P G P PPP
Sbjct: 358 PPPGGFKGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 494 PXPXPPAPXL--XVGGXXXPPPRGGXXXXPQXRGXPRKKPFXQGXPXGPQTLXKGXLVG 664
P P PP L GG PPP GG P G P P G P P G G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = +1
Query: 712 PPXXXGGNPPGALXSPGPFPP*XTPXXAL-PFSRPXXXXG-XPGPXXFPFWGXGXXVFPX 885
PP GG PP P P PP P + P P G P P P G P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Query: 886 PPXGGXXPXXP 918
PP G P P
Sbjct: 371 PPPGMFAPMAP 381
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGG--NPPGA 747
PP G P P P P P G PPP PP GG P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLP---PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 748 LXSPGPFPP 774
PG F P
Sbjct: 370 PPPPGMFAP 378
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/85 (29%), Positives = 27/85 (31%)
Frame = +1
Query: 682 PPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWG 861
PP P GG+ + GP PP P P G P P G
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-----PITG 323
Query: 862 XGXXVFPXPPXGGXXPXXPGGXPPP 936
P PP GG P G PPP
Sbjct: 324 GPP---PPPPPGGLPPISGGPPPPP 345
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +2
Query: 494 PXPXPPAPXLXVGGXXXPPPRGGXXXXPQXRGXPRKKPFXQGXP 625
P P P P + GG PPP GG P G P P G P
Sbjct: 296 PPPPPGLPPI-TGGPPPPPPPGG---LPPITGGPPPPPPPGGLP 335
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.5 bits (68), Expect = 0.90
Identities = 29/90 (32%), Positives = 30/90 (33%), Gaps = 8/90 (8%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPG---- 762
P K P P + P K P PPP PP G PPGA PG
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPP-CKPCPQGPPGPPG--PPGAPGDPGEAGT 174
Query: 763 PFPP*XTPXXALPFSR----PXXXXGXPGP 840
P P LP R P G PGP
Sbjct: 175 PGRPGTDATPGLPGPRGPPGPPGEAGQPGP 204
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/131 (29%), Positives = 38/131 (29%), Gaps = 10/131 (7%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRAS---NPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPG 744
PP G P K P P NP KG PP PP P G
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPP-CQPCPGGPP-----GPAG 159
Query: 745 ALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPP-------XGGX 903
PGP P P S P G PGP P G P P GG
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSGP-GPAGPPGPAG-PAGNDGAPGAPGGPGEPGASEQGGP 217
Query: 904 XPXXPGGXPPP 936
P G P P
Sbjct: 218 GEPGPAGPPGP 228
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/131 (29%), Positives = 38/131 (29%), Gaps = 10/131 (7%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRAS---NPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPG 744
PP G P K P P NP KG PP PP P G
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPP-CQPCPGGPP-----GPAG 159
Query: 745 ALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPP-------XGGX 903
PGP P P S P G PGP P G P P GG
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSGP-GPAGPPGPAG-PAGNDGAPGAPGGPGEPGASEQGGP 217
Query: 904 XPXXPGGXPPP 936
P G P P
Sbjct: 218 GEPGPAGPPGP 228
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 31.1 bits (67), Expect = 1.2
Identities = 36/139 (25%), Positives = 40/139 (28%), Gaps = 16/139 (11%)
Frame = +1
Query: 568 GXPPXXGXXPEKTXXPRXPXRASNPX-KGPFGGXXXXAPP-------PRXXXXKXXPPXX 723
G P G P P P +G G PP R K P
Sbjct: 142 GVPGKEGSILSSALPPSEPCIICPPGPQGAVGQQGPKGPPGPKGKSQERAADGKNGEPGM 201
Query: 724 XGG-NPPGALXSPGPFPP*XTPXXALPF------SRPXXXXGXPGPXXFP-FWGXGXXVF 879
G PPG + PGP P P + + P G PGP P G
Sbjct: 202 IGPPGPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGG 261
Query: 880 PXPPXGGXXPXXPGGXPPP 936
PP P GG PP
Sbjct: 262 QGPPGDAGGPGPVGGQGPP 280
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 31.1 bits (67), Expect = 1.2
Identities = 36/139 (25%), Positives = 40/139 (28%), Gaps = 16/139 (11%)
Frame = +1
Query: 568 GXPPXXGXXPEKTXXPRXPXRASNPX-KGPFGGXXXXAPP-------PRXXXXKXXPPXX 723
G P G P P P +G G PP R K P
Sbjct: 142 GVPGKEGSILSSALPPSEPCIICPPGPQGAVGQQGPKGPPGPKGKSQERAADGKNGEPGM 201
Query: 724 XGG-NPPGALXSPGPFPP*XTPXXALPF------SRPXXXXGXPGPXXFP-FWGXGXXVF 879
G PPG + PGP P P + + P G PGP P G
Sbjct: 202 IGPPGPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGG 261
Query: 880 PXPPXGGXXPXXPGGXPPP 936
PP P GG PP
Sbjct: 262 QGPPGDAGGPGPVGGQGPP 280
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/131 (29%), Positives = 38/131 (29%), Gaps = 10/131 (7%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRAS---NPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPG 744
PP G P K P P NP KG PP PP P G
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPP-CQPCPGGPP-----GPAG 159
Query: 745 ALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPP-------XGGX 903
PGP P P S P G PGP P G P P GG
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSGP-GPAGPPGPAG-PAGNDGAPGAPGGPGEPGASEQGGP 217
Query: 904 XPXXPGGXPPP 936
P G P P
Sbjct: 218 GEPGPAGPPGP 228
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/131 (29%), Positives = 38/131 (29%), Gaps = 10/131 (7%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRAS---NPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPG 744
PP G P K P P NP KG PP PP P G
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPP-CQPCPGGPP-----GPAG 159
Query: 745 ALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPP-------XGGX 903
PGP P P S P G PGP P G P P GG
Sbjct: 160 PAGPPGPPGPDGNPGSPAGPSGP-GPAGPPGPAG-PAGNDGAPGAPGGPGEPGASEQGGP 217
Query: 904 XPXXPGGXPPP 936
P G P P
Sbjct: 218 GEPGPAGPPGP 228
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/120 (25%), Positives = 34/120 (28%), Gaps = 8/120 (6%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXP-----PXXXGGN-PPGALXS 756
P K P P + P + P PPP + P P G N PPG
Sbjct: 104 PGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGP 163
Query: 757 PGPFPP*XTPXXALPFS--RPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXP 930
GP P P P G PG P P P G P G P
Sbjct: 164 KGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPP 223
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.6
Identities = 33/121 (27%), Positives = 36/121 (29%), Gaps = 7/121 (5%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPP--RXXXXKXXPPXXXG----GNPPGALXS 756
P K P P P KG PPP PP G P G S
Sbjct: 120 PGKPGKPGAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGS 179
Query: 757 PGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXP-PXGGXXPXXPGGXPP 933
P P P + P + P G G P G +P P G P P G P
Sbjct: 180 PAAPSPPGPPGPSGP-AGPAGNDGAAGTPG-PDGPAGESTYPEPAAPGPAGPPGPAGPPG 237
Query: 934 P 936
P
Sbjct: 238 P 238
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 935 GGGXPPGXXGXXPPXGGXGKTXXPXPQXGKXXGPGFPXXXXG 810
G G PPG G P G G P P G GPG P G
Sbjct: 179 GMGGPPGHGGQGGPPGHGGM-GGPPPGQGGPGGPGGPGGPGG 219
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -1
Query: 687 GGGGXXXXPTKXPFXRV*GPXGXPWXXGFFRGXPRXWGXXXXPPLGGGXXXPPTXXXGAG 508
GGGG P G G P G G P G PP GG PP G G
Sbjct: 159 GGGGDPRGPPG-------GMGGPPGHGGM--GGPPGHGGQGGPPGHGGMGGPPPGQGGPG 209
Query: 507 GXG 499
G G
Sbjct: 210 GPG 212
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 935 GGGXPPGXXGXXPPXGGXGKTXXPXPQXGKXXGPGFPXXXXG 810
G G PPG G P G G P P G GPG P G
Sbjct: 459 GMGGPPGHGGQGGPPGHGGM-GGPPPGQGGPGGPGGPGGPGG 499
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -1
Query: 687 GGGGXXXXPTKXPFXRV*GPXGXPWXXGFFRGXPRXWGXXXXPPLGGGXXXPPTXXXGAG 508
GGGG P G G P G G P G PP GG PP G G
Sbjct: 439 GGGGDPRGPPG-------GMGGPPGHGGM--GGPPGHGGQGGPPGHGGMGGPPPGQGGPG 489
Query: 507 GXG 499
G G
Sbjct: 490 GPG 492
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 679 PPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGP 840
PP P PP +PG FPP TP RP G PGP
Sbjct: 1222 PPHTPSPFSAGPMSHHPMGPPAYPGTPGSFPP-TTPTYPGMTPRPGPNFGPPGP 1274
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 935 GGGXPPGXXGXXPPXGGXGKTXXPXPQXGKXXGPGFP 825
G PPG G P GG G+ P P G PG P
Sbjct: 164 GSEGPPGPPGHDGPNGGPGQPGQPGPH-GPNGHPGKP 199
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 679 PPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGP 840
PP P PP +PG FPP TP RP G PGP
Sbjct: 1222 PPHTPSPFSAGPMSHHPMGPPAYPGTPGSFPP-TTPTYPGMTPRPGPNFGPPGP 1274
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 2.7
Identities = 32/124 (25%), Positives = 37/124 (29%), Gaps = 3/124 (2%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXX--GGNPPGA 747
PP E++ P+ P P APPP P P A
Sbjct: 32 PPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNA 91
Query: 748 LXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXX-FPFWGXGXXVFPXPPXGGXXPXXPGG 924
+ P P PP P A+P P P P P P PP P P
Sbjct: 92 VPVPAP-PPAPYPQHAVPAPAPPPA---PYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPH 147
Query: 925 XPPP 936
PPP
Sbjct: 148 YPPP 151
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 679 PPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGP 840
PP P PP +PG FPP TP RP G PGP
Sbjct: 1222 PPHTPSPFSAGPMSHHPMGPPAYPGTPGSFPP-TTPTYPGMTPRPGPNFGPPGP 1274
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
Frame = +1
Query: 481 PXPXPXPXX-PGPGXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRXPXRASNPXKG-- 651
P P P P P PG G PP P PR A P +G
Sbjct: 112 PTPMPFPQHFPFPGMPPMPSGPPPPSMAY-GMPPM----PSGMMPPRGMPGAYPPPRGYP 166
Query: 652 PFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGP 765
P PPP P G PPG PGP
Sbjct: 167 PAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGP 204
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/87 (25%), Positives = 26/87 (29%), Gaps = 1/87 (1%)
Frame = +1
Query: 679 PPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFW 858
P P+ PP G PP P P P +P + P P P +
Sbjct: 116 PFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYM 175
Query: 859 -GXGXXVFPXPPXGGXXPXXPGGXPPP 936
G PP PGG P P
Sbjct: 176 PPPGMPGAYPPPRMPIGHGPPGGPPMP 202
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
Frame = +1
Query: 481 PXPXPXPXX-PGPGXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRXPXRASNPXKG-- 651
P P P P P PG G PP P PR A P +G
Sbjct: 112 PTPMPFPQHFPFPGMPPMPSGPPPPSMAY-GMPPM----PSGMMPPRGMPGAYPPPRGYP 166
Query: 652 PFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGP 765
P PPP P G PPG PGP
Sbjct: 167 PAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGP 204
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/87 (25%), Positives = 26/87 (29%), Gaps = 1/87 (1%)
Frame = +1
Query: 679 PPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFW 858
P P+ PP G PP P P P +P + P P P +
Sbjct: 116 PFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYM 175
Query: 859 -GXGXXVFPXPPXGGXXPXXPGGXPPP 936
G PP PGG P P
Sbjct: 176 PPPGMPGAYPPPRMPIGHGPPGGPPMP 202
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 515 GPGXXGXGXGXGPQNPXPXXXGXGG 441
GPG G G GPQ+ P G GG
Sbjct: 520 GPGGRGQGPDFGPQDDFPGRRGSGG 544
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.6
Identities = 27/106 (25%), Positives = 29/106 (27%), Gaps = 8/106 (7%)
Frame = +1
Query: 481 PXPXPXPXXPGPGXXXXXXXXXXXXXXXXGXPPXX--------GXXPEKTXXPRXPXRAS 636
P P P P PG PP G P PR P +
Sbjct: 92 PHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPR--T 149
Query: 637 NPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP 774
P + P PP PP NPP SP P PP
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +1
Query: 679 PPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFP 852
PPP PP G P P P P +P P G P P FP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFP 354
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +1
Query: 679 PPPRXXXXKXXPPXXXGGNPPGALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFP 852
PPP PP G P P P P +P P G P P FP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFP 354
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.8
Identities = 27/107 (25%), Positives = 28/107 (26%), Gaps = 5/107 (4%)
Frame = +1
Query: 481 PXPXPXPXXPGP-GXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRXPXRASNPXKGPF 657
P P P PGP G PP P +P K
Sbjct: 141 PGPAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKS-- 198
Query: 658 GGXXXXAPPPRXXXXKXXPPXXXG----GNPPGALXSPGPFPP*XTP 786
G P P PP G GN PG PGP P P
Sbjct: 199 GQRGRGLPGPSGAPGSQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQP 245
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 772 GGKARDXLXPRGGFPPXNXGXXFXXXRXGGGGPLXKXHQ 656
GG R RGGF G + GGGGP + H+
Sbjct: 231 GGGRRGSPDRRGGFRSGGGGGGYMRSGGGGGGPDRRDHR 269
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.3
Identities = 27/107 (25%), Positives = 28/107 (26%), Gaps = 5/107 (4%)
Frame = +1
Query: 481 PXPXPXPXXPGP-GXXXXXXXXXXXXXXXXGXPPXXGXXPEKTXXPRXPXRASNPXKGPF 657
P P P PGP G PP P +P K
Sbjct: 141 PGPAGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKS-- 198
Query: 658 GGXXXXAPPPRXXXXKXXPPXXXG----GNPPGALXSPGPFPP*XTP 786
G P P PP G GN PG PGP P P
Sbjct: 199 GQRGRGLPGPSGAPGPQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQP 245
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 935 GGGXPPGXXGXXPPXGGXGKTXXPXPQXGKXXGPG 831
G G PPG G P G G + P + G+ GPG
Sbjct: 230 GRGGPPGPDGGYPMSGEPGSS-GPQGKAGQPGGPG 263
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.3
Identities = 32/117 (27%), Positives = 34/117 (29%), Gaps = 3/117 (2%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXG-GNPPGALXSPGPFP 771
P + P P NP K P PPP K P G PPGA G
Sbjct: 119 PGRPGKPGAPGLPGNPGKPPVQPCEPITPPP----CKPCPDGPAGPPGPPGAPGDAGTNG 174
Query: 772 P*XTPXXALP--FSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGGXPPP 936
P P + P G PG P G P P PG PP
Sbjct: 175 APGAPGGDAPPGEAGPKGPPGPPGSPGAP--GEPGRPGDDAPSEPLIPGEPGPQGPP 229
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 615 WXXGFFRGXPRXWGXXXXPPLGGGXXXPPTXXXGAGGXGXG 493
W G + G P WG GGG G GG G G
Sbjct: 20 WGPGGWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRG 60
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 494 PXPXPPAPXLXVGGXXXPPPRGG 562
P P PP P + G PPP GG
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGG 598
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = -1
Query: 630 PXGXPWXXGFFRGXPRXWGXXXXP--PLGGGXXXPPTXXXGAGGXGXGXRXXAP 475
P P G G P G P P+GGG P GAGG G G AP
Sbjct: 32 PPPPPCGGGCGGGAPAAGGYAVAPQAPIGGGYAQPGGGYGGAGGFG-GAYQAAP 84
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.3
Identities = 29/117 (24%), Positives = 34/117 (29%), Gaps = 3/117 (2%)
Frame = +1
Query: 595 PEKTXXPRXPXRASNPXKGPFGGXXXXAPPPRXXXXKXXPPXXXGGNPPGALXSPG-PFP 771
P + P P NP + P PPP + P P G S G P
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGSNGNPGS 173
Query: 772 P*XTPXXALPFSR-PXXXXGXPGPXXFPFW-GXGXXVFPXPPXGGXXPXXPGGXPPP 936
P P ++ P G PG P G P P PG PP
Sbjct: 174 PGQDGQPGAPGNKGPSGQNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGAPGPQGPP 230
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 8.3
Identities = 34/122 (27%), Positives = 37/122 (30%), Gaps = 3/122 (2%)
Frame = +1
Query: 574 PPXXGXXPEKTXXPRXPXRASNPXKGPFGGXXXXAP---PPRXXXXKXXPPXXXGGNPPG 744
PP G P P P S P G P P + PP G + P
Sbjct: 226 PPGTGGFP-----PGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAFPP---GASAPV 277
Query: 745 ALXSPGPFPP*XTPXXALPFSRPXXXXGXPGPXXFPFWGXGXXVFPXPPXGGXXPXXPGG 924
A PG FPP +P S P G GP G P P G P G
Sbjct: 278 APGMPGAFPP-GQGGPGMPGSFPPGAPGPGGP------GMPGSFAPGAPGPGGPGGYPSG 330
Query: 925 XP 930
P
Sbjct: 331 GP 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,647,816
Number of Sequences: 27780
Number of extensions: 302128
Number of successful extensions: 1523
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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