Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_L01
         (907 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    29   6.7  
08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671     28   8.9  
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342...    28   8.9  

>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = -2

Query: 792  PQXXNPL--FPGGWAXSLXQKXPPXPPP 715
            P    PL  FPGG A    ++ PP PPP
Sbjct: 943  PSSVTPLTQFPGGSAQQSEKRPPPPPPP 970


>08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671
          Length = 502

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -2

Query: 780 NPLFPGGWAXSLXQKXPPXPPPWTXKXXMXGNWW 679
           +PL PG     L +  PP PPPW       G  W
Sbjct: 74  HPLLPGRHFRLLER--PPPPPPWLAADDRGGGGW 105


>05_03_0634 + 16432679-16433076,16433358-16433610,16433993-16434291,
            16434553-16434729,16435001-16435621,16435690-16435784,
            16436000-16436088,16436185-16436250,16436475-16437026,
            16437879-16437953,16438305-16438375,16438456-16438513,
            16441506-16442048
          Length = 1098

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -2

Query: 252  SSSPGCTSIVSYSRNKDPHRQKPARISASLVVGSSLMTDVKHAAKKTPA 106
            S  P  ++     +NK   +QK A ISA   V S+L  D +  AK TP+
Sbjct: 977  SGRPSSSNAKGERKNKTKPKQKTANISAP--VSSALTRDPQSQAKITPS 1023


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,685,089
Number of Sequences: 37544
Number of extensions: 285857
Number of successful extensions: 594
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)