Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_K13
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 256 1e-68
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 256 1e-68
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 256 1e-68
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 107 1e-23
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 107 1e-23
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 93 2e-19
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 93 2e-19
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 91 1e-18
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 91 1e-18
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 87 2e-17
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 81 8e-16
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 77 1e-14
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 77 1e-14
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 76 4e-14
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 73 3e-13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 73 3e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 71 1e-12
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 71 1e-12
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 71 1e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 69 4e-12
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 67 2e-11
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 64 2e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 61 9e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 61 9e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 56 3e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 56 3e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 51 1e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 51 1e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 50 3e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 50 3e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 50 3e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 46 5e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 46 5e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 46 5e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 1e-04
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 256 bits (628), Expect = 1e-68
Identities = 118/153 (77%), Positives = 132/153 (86%)
Frame = +1
Query: 259 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 438
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 88
Query: 439 MGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 618
MGKTAVFV+ TLQQLEP + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 89 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 148
Query: 619 PIQKDEEVLKTACPHIVXGTPGXILALVNSKNL 717
I+KDEE L CPHIV GTPG +LAL S L
Sbjct: 149 AIKKDEERLANDCPHIVVGTPGRMLALARSGKL 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 711 ELNLKHLKHFILDECDKMLXSLXMRRDVXXIXR 809
+L L +K+F+LDECDKM+ MRRDV I +
Sbjct: 180 KLKLDKVKYFVLDECDKMIGDADMRRDVQEIVK 212
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 256 bits (628), Expect = 1e-68
Identities = 118/153 (77%), Positives = 132/153 (86%)
Frame = +1
Query: 259 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 438
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 88
Query: 439 MGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 618
MGKTAVFV+ TLQQLEP + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 89 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 148
Query: 619 PIQKDEEVLKTACPHIVXGTPGXILALVNSKNL 717
I+KDEE L CPHIV GTPG +LAL S L
Sbjct: 149 AIKKDEERLANDCPHIVVGTPGRMLALARSGKL 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 711 ELNLKHLKHFILDECDKMLXSLXMRRDVXXIXR 809
+L L +K+F+LDECDKM+ MRRDV I +
Sbjct: 180 KLKLDKVKYFVLDECDKMIGDADMRRDVQEIVK 212
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 256 bits (628), Expect = 1e-68
Identities = 118/153 (77%), Positives = 132/153 (86%)
Frame = +1
Query: 259 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 438
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 28 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 87
Query: 439 MGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 618
MGKTAVFV+ TLQQLEP + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 88 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 147
Query: 619 PIQKDEEVLKTACPHIVXGTPGXILALVNSKNL 717
I+KDEE L CPHIV GTPG +LAL S L
Sbjct: 148 AIKKDEERLANDCPHIVVGTPGRMLALARSGKL 180
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 711 ELNLKHLKHFILDECDKMLXSLXMRRDVXXIXRXLL 818
+L L +K+F+LDECDKM+ MRRDV I + ++
Sbjct: 179 KLKLDKVKYFVLDECDKMIGDADMRRDVQEIKQVMM 214
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 107 bits (256), Expect = 1e-23
Identities = 58/151 (38%), Positives = 85/151 (56%)
Frame = +1
Query: 265 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 444
++G+Y + S F D LK E+LR I GFE PS +Q I G D++ QA+SG G
Sbjct: 20 IEGNYDQVVES-FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTG 78
Query: 445 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 624
KTA F ++ LQ+++ + HV LVM TRELA QI K +Y++ V + GG +
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSV 137
Query: 625 QKDEEVLKTACPHIVXGTPGXILALVNSKNL 717
+ D+ L+ H+V GTPG + ++N L
Sbjct: 138 RDDQRKLEAGI-HVVVGTPGRVGDMINRNAL 167
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 107 bits (256), Expect = 1e-23
Identities = 58/151 (38%), Positives = 85/151 (56%)
Frame = +1
Query: 265 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 444
++G+Y + S F D LK E+LR I GFE PS +Q I G D++ QA+SG G
Sbjct: 20 IEGNYDQVVES-FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTG 78
Query: 445 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 624
KTA F ++ LQ+++ + HV LVM TRELA QI K +Y++ V + GG +
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSV 137
Query: 625 QKDEEVLKTACPHIVXGTPGXILALVNSKNL 717
+ D+ L+ H+V GTPG + ++N L
Sbjct: 138 RDDQRKLEAGI-HVVVGTPGRVGDMINRNAL 167
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 93.5 bits (222), Expect = 2e-19
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Frame = +1
Query: 268 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 444
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 445 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 624
KT VF + ++ L+ SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 625 QKDEEVLKTACPHIVXGTPGXILALV 702
+ + LK P IV GTPG I LV
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLV 155
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 714 LNLKHLKHFILDECDKMLXSLXMRRDVXXIXRXL 815
+N+ H+ F+LDE DK++ + R D+ I L
Sbjct: 160 MNMSHVDFFVLDEADKLMDEV-FRDDINIIINSL 192
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 93.5 bits (222), Expect = 2e-19
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Frame = +1
Query: 268 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 444
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 445 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 624
KT VF + ++ L+ SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 625 QKDEEVLKTACPHIVXGTPGXILALV 702
+ + LK P IV GTPG I LV
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLV 155
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 714 LNLKHLKHFILDECDKMLXSLXMRRDVXXIXRXL 815
+N+ H+ F+LDE DK++ + R D+ I L
Sbjct: 160 MNMSHVDFFVLDEADKLMDEV-FRDDINIIINSL 192
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 91.1 bits (216), Expect = 1e-18
Identities = 49/134 (36%), Positives = 71/134 (52%)
Frame = +1
Query: 316 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 495
L+ ++LR I GFE PS +Q IP + D++ QA+SG GKTA F ++ LQ L+
Sbjct: 33 LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQV 92
Query: 496 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXG 675
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 93 RETQALILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSG 150
Query: 676 TPGXILALVNSKNL 717
TPG + ++ +NL
Sbjct: 151 TPGRVFDMIRRRNL 164
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/134 (35%), Positives = 71/134 (52%)
Frame = +1
Query: 316 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 495
L+ ++LR I GFE PS +Q +P + D++ QA+SG GKTA F ++ LQ L+
Sbjct: 33 LREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQV 92
Query: 496 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXG 675
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 93 RETQALILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSG 150
Query: 676 TPGXILALVNSKNL 717
TPG + ++ +NL
Sbjct: 151 TPGRVFDMIRRRNL 164
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 86.6 bits (205), Expect = 2e-17
Identities = 47/134 (35%), Positives = 77/134 (57%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F DF L ++L I + G+E PS +Q I A+ G DIL +AK+G GKT + + +++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 481 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 660
++P+ + +V+ TRELA Q S+ SK++ ++V V GG + +D+ +
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQ-LKVMVTTGGTDL-RDDIMRLNGTV 162
Query: 661 HIVXGTPGXILALV 702
H+V TPG IL L+
Sbjct: 163 HLVIATPGRILDLM 176
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 81.4 bits (192), Expect = 8e-16
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F L +IL+A G+ P+ +Q CIP A+ G DI A +G GKTA FVL L++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 481 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 651
+ S VLV+ TRELA Q+ + + + S ++ + V + GG+ ++ E L++
Sbjct: 210 MIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDLKAQEAALRS 268
Query: 652 ACPHIVXGTPGXIL 693
P +V TPG ++
Sbjct: 269 G-PDVVVATPGRLI 281
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 77.4 bits (182), Expect = 1e-14
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = +1
Query: 373 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQIS 552
VQ CIP+ + G DIL A++G GKT F + LQ+L +Y L++ TRELAFQI+
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 553 KEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGTPGXILALVNS 708
+++ K ++ ++ SV GG + L PH+V TPG + L+ S
Sbjct: 175 EQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATPGRLADLIES 224
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 77.4 bits (182), Expect = 1e-14
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = +1
Query: 373 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQIS 552
VQ CIP+ + G DIL A++G GKT F + LQ+L +Y L++ TRELAFQI+
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 553 KEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGTPGXILALVNS 708
+++ K ++ ++ SV GG + L PH+V TPG + L+ S
Sbjct: 175 EQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATPGRLADLIES 224
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 75.8 bits (178), Expect = 4e-14
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +1
Query: 244 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 423
+V ++ K + F + + + A G+ PS++Q +P A+ G D++
Sbjct: 27 KVVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIG 86
Query: 424 QAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 603
A++G GKT F + LQ L + LV+ TRELAFQI +++E + G+ +V
Sbjct: 87 LAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGI-GLIAAV 145
Query: 604 FFGGMPIQKDEEVLKTACPHIVXGTPGXIL-ALVNSK 711
GG+ + L PHI+ TPG ++ L N+K
Sbjct: 146 IVGGVDMAAQAMALARR-PHIIVATPGRLVDHLENTK 181
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 72.9 bits (171), Expect = 3e-13
Identities = 42/143 (29%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Frame = +1
Query: 292 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 471
+ G++ L + +AI GF P+ +Q + IP + G D++ +++G GKTA FV+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 472 LQQLEPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 648
LQ+L+ + + + L++ TRELA Q K + ++ +G+R + GG I++ +
Sbjct: 83 LQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIH 141
Query: 649 TACPHIVXGTPGXILALVNSKNL 717
P I+ TPG +L ++ +L
Sbjct: 142 EN-PDILLATPGRLLHVIVEMDL 163
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 72.9 bits (171), Expect = 3e-13
Identities = 42/143 (29%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Frame = +1
Query: 292 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 471
+ G++ L + +AI GF P+ +Q + IP + G D++ +++G GKTA FV+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 472 LQQLEPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 648
LQ+L+ + + + L++ TRELA Q K + ++ +G+R + GG I++ +
Sbjct: 83 LQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIH 141
Query: 649 TACPHIVXGTPGXILALVNSKNL 717
P I+ TPG +L ++ +L
Sbjct: 142 EN-PDILLATPGRLLHVIVEMDL 163
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 70.9 bits (166), Expect = 1e-12
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Frame = +1
Query: 295 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 468
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 209 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 268
Query: 469 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 642
L +++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 269 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 328
Query: 643 LKTACPHIVXGTPG 684
+ IV GTPG
Sbjct: 329 TE----QIVIGTPG 338
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 70.9 bits (166), Expect = 1e-12
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Frame = +1
Query: 295 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 468
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 234 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 293
Query: 469 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 642
L +++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 294 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 353
Query: 643 LKTACPHIVXGTPG 684
+ IV GTPG
Sbjct: 354 TE----QIVIGTPG 363
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 70.9 bits (166), Expect = 1e-12
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Frame = +1
Query: 295 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 468
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 618 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 469 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 642
L +++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 678 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 737
Query: 643 LKTACPHIVXGTPG 684
+ IV GTPG
Sbjct: 738 TE----QIVIGTPG 747
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 70.5 bits (165), Expect = 1e-12
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Frame = +1
Query: 262 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 441
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 128 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 187
Query: 442 GKTAVFVLATLQQL---------EPSESH---VY---VLVMCHTRELAFQISKEYERFSK 576
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 188 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 246
Query: 577 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGTPGXILALV 702
Y S ++ ++ +GG +D+ A HI+ TPG ++ ++
Sbjct: 247 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 288
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 70.5 bits (165), Expect = 1e-12
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Frame = +1
Query: 262 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 441
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 112 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 171
Query: 442 GKTAVFVLATLQQL---------EPSESH---VY---VLVMCHTRELAFQISKEYERFSK 576
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 172 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 230
Query: 577 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGTPGXILALV 702
Y S ++ ++ +GG +D+ A HI+ TPG ++ ++
Sbjct: 231 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 272
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 70.5 bits (165), Expect = 1e-12
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Frame = +1
Query: 262 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 441
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 109 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 168
Query: 442 GKTAVFVLATLQQL---------EPSESH---VY---VLVMCHTRELAFQISKEYERFSK 576
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 169 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 227
Query: 577 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGTPGXILALV 702
Y S ++ ++ +GG +D+ A HI+ TPG ++ ++
Sbjct: 228 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 269
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 68.9 bits (161), Expect = 4e-12
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Frame = +1
Query: 265 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 444
+KG V + + E+ +A+ + G+ P+ +Q + IP + D++ A++G G
Sbjct: 291 IKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSG 350
Query: 445 KTAVFVL------ATLQQLEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRV 597
KTA F+L +L ++E E Y ++M TRELA QI +E +F K + V
Sbjct: 351 KTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTV 410
Query: 598 SVFFGGMPIQKDEEVLKTACPHIVXGTPGXILALVNSKNLI*N 726
SV G ++D+ + +V TPG +L ++ ++ L+ N
Sbjct: 411 SVIGGAS--REDQGMKLRMGVEVVIATPGRLLDVLENRYLLLN 451
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 66.9 bits (156), Expect = 2e-11
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Frame = +1
Query: 253 PKKEVKGSYVSIHSSGFRDFLLKP-EILRAIVDCGFEHPSEVQHECIPQAVLG-MDILCQ 426
PKK K + S ++ F P E+L AI GF P+E+Q +P AV D+L
Sbjct: 140 PKKSKKEASKKTDISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGA 199
Query: 427 AKSGMGKTAVF---VLATL-------QQLEPSESH-VYVLVMCHTRELAFQISKEYERFS 573
A++G GKT F ++A L Q+ E +E L++ TREL QI K
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 259
Query: 574 KYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGTPGXILALV 702
+ S+ GG+ K E ++ P IV TPG + A++
Sbjct: 260 STTQLIATSI-VGGLAQVKQERIISQQRPDIVVATPGRLWAMM 301
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 63.7 bits (148), Expect = 2e-10
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL-- 474
F F ++ AI +E P+ +Q IP A+ G D+L AK+G GKTA ++ +
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 475 ----QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 642
L+ E V V+V+ TRELA Q+ +E ++F K + + + GG ++ E
Sbjct: 327 IMDQPDLKAGEGPVAVIVV-PTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNE- 384
Query: 643 LKTACPHIVXGTPGXILALV 702
L+ +V TPG I+ LV
Sbjct: 385 LQNEGAEMVVCTPGRIIDLV 404
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 61.3 bits (142), Expect = 9e-10
Identities = 34/131 (25%), Positives = 65/131 (49%)
Frame = +1
Query: 316 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 495
LK E+LR I GFE PS +Q + G D+ Q+++G GKT + ++ LQ ++ +
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 496 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXG 675
+H+ V+++ R +A + +E+ + V+ G + + + H++ G
Sbjct: 63 AHLQVILLAPQRGMA---QRAHEQLKSLGRNLNVNATCLGFDTTAENDKIS----HVLMG 115
Query: 676 TPGXILALVNS 708
TP L+ + S
Sbjct: 116 TPKDFLSNIPS 126
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 61.3 bits (142), Expect = 9e-10
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Frame = +1
Query: 355 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ------QLEPSESHVYVLV 516
+ P+ +Q + IP + G D++ AK+G GKT F+L + +LE + + V +
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAV-I 382
Query: 517 MCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGTPGXIL 693
+ TRELA Q KE +F+K + G++V+ +GG+ I + LK IV TPG ++
Sbjct: 383 LAPTRELAMQTYKEANKFAKPL-GLKVACTYGGVGISEQIADLKRGA-EIVVCTPGRMI 439
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 56.4 bits (130), Expect = 3e-08
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Frame = +1
Query: 268 KGSYVSIHS-SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 444
+G V+I F D + + R + G+ + +Q +P G DIL A++G G
Sbjct: 288 RGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSG 347
Query: 445 KTAVFVLATLQQL-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRV 597
KTA F+L + +L +E Y +++ TRELA QI E +FS Y S + +
Sbjct: 348 KTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFS-YQSVMEI 406
Query: 598 SVFFGGMPIQKDEEVLKTACPHIVXGTPGXI 690
+GG+ + ++ + C I+ GT G +
Sbjct: 407 KPVYGGINVGYNKSQIMKGCT-IIVGTIGRV 436
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 56.4 bits (130), Expect = 3e-08
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Frame = +1
Query: 268 KGSYVSIHS-SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 444
+G V+I F D + + R + G+ + +Q +P G DIL A++G G
Sbjct: 288 RGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSG 347
Query: 445 KTAVFVLATLQQL-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRV 597
KTA F+L + +L +E Y +++ TRELA QI E +FS Y S + +
Sbjct: 348 KTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFS-YQSVMEI 406
Query: 598 SVFFGGMPIQKDEEVLKTACPHIVXGTPGXI 690
+GG+ + ++ + C I+ GT G +
Sbjct: 407 KPVYGGINVGYNKSQIMKGCT-IIVGTIGRV 436
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 54.0 bits (124), Expect = 1e-07
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Frame = +1
Query: 352 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL-------ATLQQLEPSESH--- 501
GFE PS +Q + P + G D + +++G GKT F+L A L Q E ++
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 502 -VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGT 678
+VLV+ TRELA QI E +++S +G + +GG + E + IV T
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV-EIVIAT 219
Query: 679 PGXILALVN 705
PG + L N
Sbjct: 220 PGRLTDLSN 228
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 51.2 bits (117), Expect = 1e-06
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F DF L L + D + P+E+Q + I ++ G D++ AK+G GKT V+ L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 481 LEPSE-SHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 648
L ++ S Y L++ TRELA Q + G + GG + + +
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAH-HGFSCGLVIGGSDVAFERN--R 194
Query: 649 TACPHIVXGTPGXIL 693
+ +I+ TPG +L
Sbjct: 195 ISGINIIVCTPGRLL 209
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 50.8 bits (116), Expect = 1e-06
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Frame = +1
Query: 355 FEHPSEVQHECIPQAVLG-MDILCQAKSGMGKTAVF---VLATL-------QQLEPSESH 501
F P+E+Q +P AV D+L A++G GKT F ++A L Q+ E +E
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 502 -VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGT 678
L++ TREL QI K + S+ GG+ K E ++ P IV T
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIV-GGLAQVKQERIISQQRPDIVVAT 126
Query: 679 PGXILALV 702
PG + A++
Sbjct: 127 PGRLWAMM 134
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 50.8 bits (116), Expect = 1e-06
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F DF L IL++I + G+E ++VQ I A+ +I+ +A++G GKT F++ +Q+
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 481 L----EPSESHV--YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE-E 639
L + ++ V +++ T+EL QI K + + S+ + ++ I ++E
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQA---INLCDINEEENS 207
Query: 640 VLKTACPHIVXGTPGXILAL 699
V H+V TPG +L +
Sbjct: 208 VWLEDRSHVVVTTPGKLLRM 227
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 50.4 bits (115), Expect = 2e-06
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Frame = +1
Query: 328 ILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE----PSE 495
+L+A+ GF +E+Q + I + G D+L AK+G GKT F+L ++ L
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 496 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS--VFFGGMPIQKDEEVLKTACPHIV 669
+ V+++ TREL+ Q Y S+ + G ++ + GG +++ L I+
Sbjct: 139 NGTGVIIVSPTRELSMQ---TYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGV-SIL 194
Query: 670 XGTPGXIL-ALVNSKNLI 720
TPG +L L N+ N +
Sbjct: 195 VATPGRLLDHLQNTDNFL 212
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 49.6 bits (113), Expect = 3e-06
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +1
Query: 355 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESH------VYVLV 516
F+ P+ +Q P A+ G DI+ AK+G GKT F+L L + ++H VLV
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHI-TKQAHRQRGEGPAVLV 207
Query: 517 MCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVXGTPGXILA 696
+ TRELA Q+ + F + G++++ FGG L+ IV TPG +L
Sbjct: 208 LLPTRELAQQVQEVSIDFC-HSLGLKMTCLFGGASKGPQARDLERGV-DIVVATPGRLLD 265
Query: 697 LVNS 708
+++
Sbjct: 266 FLDN 269
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 49.6 bits (113), Expect = 3e-06
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 481 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 633
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 634 EEVLKTACPHIVXGTPGXI 690
+ ++ I+ GT G I
Sbjct: 462 KGQIEKGAT-IIVGTVGRI 479
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 49.6 bits (113), Expect = 3e-06
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 481 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 633
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 634 EEVLKTACPHIVXGTPGXI 690
+ ++ I+ GT G I
Sbjct: 462 KGQIEKGAT-IIVGTVGRI 479
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 49.6 bits (113), Expect = 3e-06
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 481 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 633
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 634 EEVLKTACPHIVXGTPGXI 690
+ ++ I+ GT G I
Sbjct: 462 KGQIEKGAT-IIVGTVGRI 479
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 49.2 bits (112), Expect = 4e-06
Identities = 34/139 (24%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Frame = +1
Query: 316 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 495
L PE+L + D ++ ++VQ + D++ ++ +G GKT FVL ++ ++ ++
Sbjct: 17 LGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAK 75
Query: 496 ---SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 666
+ + L++ +REL QI + F++ ++ + V GG + K+ ++ K +I
Sbjct: 76 LQPADIGALILSPSRELCSQIVSVIQPFAEKLN-LTVETVTGGQKVDKNIKMFKNKNVNI 134
Query: 667 VXGTPGXILALV-NSKNLI 720
+ TPG + ++ + K LI
Sbjct: 135 LVATPGRLFQIIQHEKTLI 153
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 45.6 bits (103), Expect = 5e-05
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 481 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 633
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 634 EEVLKTACPHIVXGTPGXI 690
+ ++ I+ GT G I
Sbjct: 673 KGQIEKGAT-IIVGTVGRI 690
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 45.6 bits (103), Expect = 5e-05
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 481 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 633
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 634 EEVLKTACPHIVXGTPGXI 690
+ ++ I+ GT G I
Sbjct: 673 KGQIEKGAT-IIVGTVGRI 690
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 45.6 bits (103), Expect = 5e-05
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Frame = +1
Query: 301 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 480
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 481 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 633
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 634 EEVLKTACPHIVXGTPGXI 690
+ ++ I+ GT G I
Sbjct: 673 KGQIEKGAT-IIVGTVGRI 690
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 44.4 bits (100), Expect = 1e-04
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Frame = +1
Query: 262 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 441
E++ + + + + + L P IL + + + +Q IPQ + G D+L QA++
Sbjct: 370 EIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSA 429
Query: 442 GKTAVFVLATLQQLEPSESHV----------YVLVMCHTRELAFQISKEYERFSKYMSGV 591
GKTA F L + ++ + L++ TRELA QI + + + + +
Sbjct: 430 GKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQ-NTDI 488
Query: 592 RVSVFFGGMPIQKDEEVLKTACPHIVXGTPGXIL 693
V + +G + ++ C I+ GT G I+
Sbjct: 489 IVLLSYGQSDRARSLNEIRNGC-DILIGTCGRIM 521
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 44.4 bits (100), Expect = 1e-04
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Frame = +1
Query: 352 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHV--------Y 507
G P+ +Q + IP A+ G D++ A +G GKT FVL + E + +
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 508 VLVMCHTRELAFQ----ISKEYERFSKY-MSGVRVSVFFGGMPIQKDEEVLKTACPHIVX 672
L++ +RELA Q I + ++ K + +R + GG+PI + + ++ HIV
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI-HIVV 327
Query: 673 GTPGXILALVNSK 711
TPG + ++ K
Sbjct: 328 ATPGRLSDMLTKK 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,160,913
Number of Sequences: 27780
Number of extensions: 371485
Number of successful extensions: 1010
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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